RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CHATP28329 748 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 CNN3Q15417 329 aaKnown RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 SHHQ15465 462 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 SP5Q6BEB4 398 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 C16orf47Q6ZP98 133 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 Q6ZS49 121 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 C6orf201Q7Z4U5 140 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF100Q8IYN0 542 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 RTN4IP1Q8WWV3 396 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 MOB3AQ96BX8 217 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 RSRP1Q9BUV0 290 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 METTL7AQ9H8H3 244 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 PIGLQ9Y2B2 252 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 IGHV3-20A0A0C4DH32 117 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 DUXBA0A1W2PPF3 345 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
C9orf3-204ENST00000424143 SULT1A1P50225 295 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
C9orf3-204ENST00000424143 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 SHBQ15464 509 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 NKAIN1Q4KMZ8 207 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 ABCA11PQ4W5N1 156 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 FAM27BQ5VT28 67 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM42Q69YG0 159 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 LHFPL2Q6ZUX7 228 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 CPEB2Q7Z5Q1 589 aaKnown RBP13.27□□□□□ -0.29
C9orf3-204ENST00000424143 OR4D5Q8NGN0 318 aa13.27□□□□□ -0.29
C9orf3-204ENST00000424143 LIN37Q96GY3 246 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-204ENST00000424143 ATXN7L1Q9ULK2 861 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-204ENST00000424143 NSG1A0A0A6YYJ2 146 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 CXorf65A6NEN9 183 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 SHISA8B8ZZ34 492 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 M0R135 149 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 MSTNO14793 375 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 DNPH1O43598 174 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 FAHP16930 419 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 ANOS1P23352 680 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 ID4P47928 161 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 CLDN17P56750 224 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF266Q14584 549 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 KRTAP27-1Q3LI81 207 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 HIKESHIQ53FT3 197 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 DPPA3Q6W0C5 159 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 FOXRED2Q8IWF2 684 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM123Q8N131 208 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM156Q8N614 296 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 SPACA9Q96E40 222 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF799Q96GE5 643 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 TECTBQ96PL2 329 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 EIF5A2Q9GZV4 153 aaKnown RBP13.26□□□□□ -0.29
C9orf3-204ENST00000424143 BCO1Q9HAY6 547 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-204ENST00000424143 AK3Q9UIJ7 227 aa13.26□□□□□ -0.29
C9orf3-204ENST00000424143 NCOA6Q14686 2063 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-204ENST00000424143 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 A0A1W2PNR3 127 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 A0A1W2PPH5 198 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 A6NLC8 198 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 M0R036 132 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 TP53I11O14683 189 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 DHHO43323 396 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 PITX3O75364 302 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 OR5AC1P0C628 307 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 CRYGSP22914 178 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 AFF3P51826 1226 aaKnown RBP13.25□□□□□ -0.29
C9orf3-204ENST00000424143 RND3P61587 244 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 GNMTQ14749 295 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 CARD17Q5XLA6 110 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 HEPN1Q6WQI6 88 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 Q6ZS52 159 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 WDSUB1Q8N9V3 476 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 SMRP1Q8NCR6 262 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 MAFIPQ8WZ33 124 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 SGK3Q96BR1 496 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 IP6K3Q96PC2 410 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 SPIN2AQ99865 258 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 SPIN2BQ9BPZ2 258 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 LIME1Q9H400 295 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF286AQ9HBT8 521 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-204ENST00000424143 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
C9orf3-204ENST00000424143 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 CLEC18AA5D8T8 446 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 NME2P1O60361 137 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 IGHV2-70P01814 119 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 CEACAM1P13688 526 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 PNLIPP16233 465 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 HOXA5P20719 270 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SFTPDP35247 375 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 LTBRP36941 435 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms