RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
BRAT1-202ENST00000421712 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TRBV5-5A0A0J9YX44 114 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 RFPL4AA6NLU0 287 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 RFPL4AL1F8VTS6 287 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TRAPPC2LH3BP13 241 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-202ENST00000421712 SPRY1O43609 319 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-202ENST00000421712 NDUFB3O43676 98 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 NOS1APO75052 506 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-202ENST00000421712 ALX3O95076 343 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TFF1P04155 84 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 CD1AP06126 327 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 PSG2P11465 335 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 GATA3P23771 443 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 SRP14P37108 136 aaKnown RBP13.12□□□□□ -0.31
BRAT1-202ENST00000421712 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 DOC2BQ14184 412 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 KISS1Q15726 138 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 LIPKQ5VXJ0 399 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 STUMQ69YW2 141 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 FAM216BQ8N7L0 139 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 CPNE2Q96FN4 548 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-202ENST00000421712 MED30Q96HR3 178 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 NRIP2Q9BQI9 281 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 TMEM160Q9NX00 188 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 MTCH1Q9NZJ7 389 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 OR14J1Q9UGF5 321 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 MTORP42345 2549 aa13.12□□□□□ -0.31
BRAT1-202ENST00000421712 KIAA1324LA8MWY0 1029 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-202ENST00000421712 A8MXK9 166 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 DVL1O14640 695 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 ANGPTL7O43827 346 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 CRLF1O75462 422 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 TGFBR2P37173 567 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 CAPZA1P52907 286 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
BRAT1-202ENST00000421712 PDZK1IP1Q13113 114 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 CD276Q5ZPR3 534 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 ZNF841Q6ZN19 808 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 SVOPQ8N4V2 548 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 OR51A2Q8NGJ7 313 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 ANGPTL6Q8NI99 470 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 EMG1Q92979 244 aaKnown RBP13.11□□□□□ -0.31
BRAT1-202ENST00000421712 FAM192AQ9GZU8 254 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 ELL3Q9HB65 397 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-202ENST00000421712 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 KAAG1Q9UBP8 84 aa13.11□□□□□ -0.31
BRAT1-202ENST00000421712 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 A0A1B0GW55 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 MRPS14O60783 128 aaKnown RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ACAA1P09110 424 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L2P0CJ85 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L3P0CJ86 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L4P0CJ87 422 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L5P0CJ88 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L6P0CJ89 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L7P0CJ90 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 CALCBP10092 127 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 NDUFB7P17568 137 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 BCL3P20749 454 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 MAPK3P27361 379 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 BDKRB2P30411 391 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 PRDX2P32119 198 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 IL13RA1P78552 427 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 MLLT11Q13015 90 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 GPR50Q13585 617 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ACSM3Q53FZ2 586 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4L9Q6RFH8 374 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 FIP1L1Q6UN15 594 aaKnown RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ZNF788Q6ZQV5 615 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ZNF367Q7RTV3 350 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 RNF144BQ7Z419 303 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 Q8IYB0 196 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 H1FXQ92522 213 aaKnown RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 THRSPQ92748 146 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 MGLLQ99685 303 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 NUDT16L1Q9BRJ7 211 aaKnown RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 MRI1Q9BV20 369 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 SMURF1Q9HCE7 757 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 ISYNA1Q9NPH2 558 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms