RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PDZD9Q8IXQ8 264 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 RDH10Q8IZV5 341 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 LGALS12Q96DT0 336 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
NUP50-204ENST00000417702 J3QLW9 94 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 M0R1W7 72 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 FADS2O95864 444 aaKnown RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 DBTP11182 482 aaKnown RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 ZNF19P17023 458 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 PRDX2P32119 198 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 IL24Q13007 206 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 IL18R1Q13478 541 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 UBE2V2Q15819 145 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 FDX2Q6P4F2 183 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 CALHM1Q8IU99 346 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 TMEM86BQ8N661 226 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 C4orf36Q96KX1 117 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 ELL3Q9HB65 397 aaPredicted RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 CAB39Q9Y376 341 aaPredicted RBP12.6□□□□□ -0.39
NUP50-204ENST00000417702 FAM96BQ9Y3D0 163 aa12.6□□□□□ -0.39
NUP50-204ENST00000417702 H0YAE9 185 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 CRYBA1P05813 215 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 MELTFP08582 738 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 ZNF20P17024 532 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 CAPGP40121 348 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 CCR9P51686 369 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
NUP50-204ENST00000417702 GALEQ14376 348 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
NUP50-204ENST00000417702 ALG8Q9BVK2 526 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 VCX3BQ9H321 246 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 AMBNQ9NP70 447 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 INPP5EQ9NRR6 644 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 FRRS1LQ9P0K9 344 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 HHLA2Q9UM44 414 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
NUP50-204ENST00000417702 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
NUP50-204ENST00000417702 A0A0U1RQK1 487 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 CLIC3O95833 236 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 KNG1P01042 644 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 ISG15P05161 165 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 OCM2P0CE71 109 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 OCMP0CE72 109 aaPredicted RBP12.58□□□□□ -0.4
NUP50-204ENST00000417702 PRKACBP22694 351 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 ATP1B3P54709 279 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 RAB40BQ12829 278 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 LHFPL3Q86UP9 236 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 EGFL6Q8IUX8 553 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 SYS1Q8N2H4 156 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 Q8N7P7 452 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 DNAAF1Q8NEP3 725 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
NUP50-204ENST00000417702 PELI1Q96FA3 418 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 CEP19Q96LK0 163 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
NUP50-204ENST00000417702 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 RNASEK-C17orf49H0YIS7 233 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 H0YJX3 145 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 CYB5AP00167 134 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 RPSAP08865 295 aaKnown RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 ATF1P18846 271 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 CEBPDP49716 269 aaPredicted RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 RBP2P50120 134 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 RPL31P62899 125 aaKnown RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 RIPK1Q13546 671 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 ALKBH1Q13686 389 aaKnown RBP12.57□□□□□ -0.4
NUP50-204ENST00000417702 KLHL22Q53GT1 634 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 SLC25A26Q70HW3 274 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 ZNF676Q8N7Q3 588 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 OR5D13Q8NGL4 314 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 APH1BQ8WW43 257 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 NRG4Q8WWG1 115 aa12.57□□□□□ -0.4
NUP50-204ENST00000417702 SLAMF9Q96A28 289 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms