RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 RAB3AP20336 220 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 MTCP1P56278 107 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
SKA1-203ENST00000417656 CR1LQ2VPA4 569 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 Q499Y3 187 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
SKA1-203ENST00000417656 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 ACP7Q6ZNF0 438 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 OR5D18Q8NGL1 313 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 OR5D14Q8NGL3 314 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 C12orf43Q96C57 262 aaKnown RBP10.39□□□□□ -0.75
SKA1-203ENST00000417656 CLN8Q9UBY8 286 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 OR5V1Q9UGF6 321 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 IGKV1D-17A0A075B6S4 117 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 OR2AT4A6NND4 320 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 F8VVB4 439 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 F8VWA3 439 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 NDUFA2O43678 99 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 ANGPTL7O43827 346 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 NOS1APO75052 506 aaPredicted RBP10.38□□□□□ -0.75
SKA1-203ENST00000417656 CD1AP06126 327 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 HSMCR30P0CW71 290 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 CPT2P23786 658 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 PPP3R1P63098 170 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 DCAF12L2Q5VW00 463 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 ZNF529Q6P280 563 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 CRIP3Q6Q6R5 217 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 ZNF367Q7RTV3 350 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 ANGPTL6Q8NI99 470 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 UFD1Q92890 307 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 CEP19Q96LK0 163 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 GAFA1Q96PS6 74 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 DERL3Q96Q80 235 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 NKX3-1Q99801 234 aaPredicted RBP10.38□□□□□ -0.75
SKA1-203ENST00000417656 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 NEK6Q9HC98 313 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 TMEM160Q9NX00 188 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 ZNF222Q9UK12 451 aa10.38□□□□□ -0.75
SKA1-203ENST00000417656 TRAV8-7A0A075B6U6 113 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 TRBV5-7A0A0A0MS05 114 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 A0A0G2JMP0 313 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 A0A0X1KG70 313 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 A0A1W2PPK0 400 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 MAGEA13PA6NCF6 341 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 ZNF879B4DU55 563 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 C22orf46C9J442 243 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 DVL1O14640 695 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 CRLF1O75462 422 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 ALX3O95076 343 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 PSG2P11465 335 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 FSTP19883 344 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 BCL3P20749 454 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 PCMT1P22061 227 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 GABRA2P47869 451 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
SKA1-203ENST00000417656 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
SKA1-203ENST00000417656 IKZF1Q13422 519 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 INSL4Q14641 139 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 LIPKQ5VXJ0 399 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 ZNF788Q6ZQV5 615 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 OR4M2Q8NGB6 313 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 ST8SIA4Q92187 359 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 EMG1Q92979 244 aaKnown RBP10.37□□□□□ -0.75
SKA1-203ENST00000417656 SHARPINQ9H0F6 387 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 ACOT13Q9NPJ3 140 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 RBFOX1Q9NWB1 397 aaKnown RBP10.37□□□□□ -0.75
SKA1-203ENST00000417656 RASL12Q9NYN1 266 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 IL36RNQ9UBH0 155 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
SKA1-203ENST00000417656 POLR3KQ9Y2Y1 108 aaPredicted RBP10.37□□□□□ -0.75
SKA1-203ENST00000417656 IGHV2-70DA0A0C4DH43 119 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 IGKV1-12A0A0C4DH73 117 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 RFPL4AA6NLU0 287 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 RFPL4AL1F8VTS6 287 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 GABRPO00591 440 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 PIN1P1O15428 100 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 CYB5AP00167 134 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 IGKV1D-12P01611 117 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 CALCBP10092 127 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 IGFBP3P17936 291 aaPredicted RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 NPBWR2P48146 333 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 NPY4RP50391 375 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 SNU13P55769 128 aaKnown RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 ZP1P60852 638 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 RPS25P62851 125 aaKnown RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 IL13RA1P78552 427 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 PAX2Q02962 417 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 PDZK1IP1Q13113 114 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 KISS1Q15726 138 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms