RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SOCS1O15524 211 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 MBP02144 154 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 GPR12P47775 334 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 MGAT2Q10469 447 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 DGAT2L6Q6ZPD8 337 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 OR10G3Q8NGC4 313 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 TTC9Q92623 222 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 ERGIC1Q969X5 290 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 UBE2L5PA0A1B0GUS4 154 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 HSBP1O75506 76 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 TOX4O94842 621 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 TBPP20226 339 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 CD27P26842 260 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 PPIAP62937 165 aaKnown RBP11.49□□□□□ -0.57
SCN1B-202ENST00000415950 TBC1D28Q2M2D7 210 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 OR2A2Q6IF42 318 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
SCN1B-202ENST00000415950 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 C17orf51A8MQB3 221 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 H0YIG0 161 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 CHRNB4P30926 498 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 HNRNPA3P51991 378 aaKnown RBP11.48□□□□□ -0.57
SCN1B-202ENST00000415950 LIMK1P53667 647 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 ZIC1Q15915 447 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 RTL10Q7L3V2 364 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 PHOSPHO2Q8TCD6 241 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 MOB1AQ9H8S9 216 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 HS3ST3A1Q9Y663 406 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 SIPA1L1O43166 1804 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 CCDC187A0A096LP49 1063 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 CXCL10P02778 98 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 RRADP55042 308 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 GNB1P62873 340 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 MESTQ5EB52 335 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 ARRDC1Q8N5I2 433 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 RFESDQ8TAC1 157 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 PBX4Q9BYU1 374 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 A0A087WV48 116 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 A0A1W2PP11 408 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 OR3A4PP47883 348 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 SUMO1P63165 101 aaKnown RBP11.48□□□□□ -0.57
SCN1B-202ENST00000415950 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 FAM122AQ96E09 287 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 COX14Q96I36 57 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 RTL8AQ9BWD3 113 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 KCNE5Q9UJ90 142 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 GREM1O60565 184 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 PIAS2O75928 621 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 METTL15P1P0C7V9 234 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 PATE4P0C8F1 98 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF17P17021 662 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 RCC1P18754 421 aaPredicted RBP11.48□□□□□ -0.57
SCN1B-202ENST00000415950 DTYMKP23919 212 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 C2orf68Q2NKX9 166 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 MENTQ9BUN1 341 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 UCK1Q9HA47 277 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
SCN1B-202ENST00000415950 ANKUB1A6NFN9 424 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ABCD4O14678 606 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ZP1P60852 638 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CEACAM16Q2WEN9 425 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 FAAP24Q9BTP7 215 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 MPDZO75970 2070 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CDRT15L2A8MXV6 281 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 IL10RAQ13651 578 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ACSM6Q6P461 480 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ST8SIA1Q92185 356 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 OXGR1Q96P68 337 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CES1P1Q9UKY3 287 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF835Q9Y2P0 537 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 TMEM229AB2RXF0 380 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 C1QL1O75973 258 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CST4P01036 141 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CHRNA7P36544 502 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ID4P47928 161 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CLDN15P56746 228 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 OR5C1Q8NGR4 320 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 PLA2G2FQ9BZM2 168 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 GSTZ1O43708 216 aaPredicted RBP11.47□□□□□ -0.57
SCN1B-202ENST00000415950 EPPINO95925 133 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 NAT2P11245 290 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 TMEM33P57088 247 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
SCN1B-202ENST00000415950 MOGAT2Q3SYC2 334 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms