RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 POU3F2P20265 443 aaPredicted RBP12.86□□□□□ -0.35
USP4-203ENST00000415188 ANOS1P23352 680 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 CYCSP99999 105 aaKnown RBP12.86□□□□□ -0.35
USP4-203ENST00000415188 ARFRP1Q13795 201 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
USP4-203ENST00000415188 UBE2V2Q15819 145 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 HYAL4Q2M3T9 481 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 ZNF766Q5HY98 468 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 CRIP3Q6Q6R5 217 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 RNF144BQ7Z419 303 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 ZNF100Q8IYN0 542 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
USP4-203ENST00000415188 NUP50Q9UKX7 468 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 GPR132Q9UNW8 380 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 SESN1Q9Y6P5 492 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 CENPEQ02224 2701 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CXCL13O43927 109 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CYTIPO60759 359 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 FCGR2AP12318 317 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 M6PRP20645 277 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 OR1C1Q15619 314 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 C1QTNF12Q5T7M4 302 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 PEG10Q86TG7 708 aaKnown RBP12.85□□□□□ -0.35
USP4-203ENST00000415188 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 OR10D3Q8NH80 312 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
USP4-203ENST00000415188 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 TECTBQ96PL2 329 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 PECRQ9BY49 303 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 PFDN2Q9UHV9 154 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 ATPIF1Q9UII2 106 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 TIMM10BQ9Y5J6 103 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CACNA1DQ01668 2161 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CRYBG3Q68DQ2 2970 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 MED12Q93074 2177 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 C5orf63A6NC05 138 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 RAD51DO75771 328 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 SFT2D2O95562 160 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
USP4-203ENST00000415188 NMBP08949 121 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 GDF1P27539 372 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 OR3A2P47893 321 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 BAMBIQ13145 260 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 SFRP5Q5T4F7 317 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 ZNF660Q6AZW8 331 aaPredicted RBP12.85□□□□□ -0.35
USP4-203ENST00000415188 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 RGS7BPQ6MZT1 257 aaPredicted RBP12.85□□□□□ -0.35
USP4-203ENST00000415188 LURAP1LQ8IV03 231 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 NMES1Q9C002 83 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 METTL9Q9H1A3 318 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 RDH8Q9NYR8 311 aa12.85□□□□□ -0.35
USP4-203ENST00000415188 CELSR2Q9HCU4 2923 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 TRGV8A0A0C4DH27 118 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 A0A1W2PP11 408 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 BCL2L11O43521 198 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 HPNP05981 417 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 VAMP1P23763 118 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
USP4-203ENST00000415188 GFRA1P56159 465 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 PLXDC2Q6UX71 529 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 ASCL4Q6XD76 172 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 ACOT7LQ6ZUV0 252 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 ADAD2Q8NCV1 583 aaKnown RBP12.84□□□□□ -0.35
USP4-203ENST00000415188 COQ8AQ8NI60 647 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 MARCH1Q8TCQ1 289 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 POM121Q96HA1 1249 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 REEP6Q96HR9 211 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 Q96M66 194 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 FOXB1Q99853 325 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 FAM173AQ9BQD7 235 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 LINC00470Q9BZP3 86 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 FN3KRPQ9HA64 309 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 CRLF2Q9HC73 371 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 RAB18Q9NP72 206 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 EDARQ9UNE0 448 aa12.84□□□□□ -0.35
USP4-203ENST00000415188 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 CDK2AP1O14519 115 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 DBHP09172 617 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 AKR1C4P17516 323 aa12.83□□□□□ -0.36
USP4-203ENST00000415188 SERPINA2P20848 420 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms