RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 COMMD9Q9P000 198 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 FBLN5Q9UBX5 448 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CDX4O14627 284 aaPredicted RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 RCBTB2O95199 551 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PMS2P2O95744 297 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 C1QTNF9P0C862 333 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 GKN3PP0CG01 181 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PET100P0DJ07 73 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PRF1P14222 555 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ABOP16442 354 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR3A1P47881 315 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ID2Q02363 134 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 DUSP2Q05923 314 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SRSF4Q08170 494 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 CDK5R1Q15078 307 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PEA15Q15121 130 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TOMM34Q15785 309 aaPredicted RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 C2orf68Q2NKX9 166 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 NKAPLQ5M9Q1 402 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM64Q6YI46 380 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR4N5Q8IXE1 308 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 RNF113BQ8IZP6 322 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 BEST3Q8N1M1 668 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SUMF1Q8NBK3 374 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SYNPRQ8TBG9 265 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SFXN5Q8TD22 340 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 MRGPRDQ8TDS7 321 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 WNT2BQ93097 391 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF471Q9BX82 626 aaPredicted RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR52D1Q9H346 318 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 CMC2Q9NRP2 79 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 MIOXQ9UGB7 285 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 GVINP1Q7Z2Y8 2422 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TRAV14DV4A0A0A6YYC5 116 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM150CB9EJG8 249 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 FGF16O43320 207 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 AIFM1O95831 613 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ACTL6AO96019 429 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 IGHV2-70P01814 119 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 FBP1P09467 338 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 GABRA4P48169 554 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TAS2R20P59543 309 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 STXBP1P61764 594 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 CSRP2Q16527 193 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ULK3Q6PHR2 472 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ACOT7LQ6ZUV0 252 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ABHD13Q7L211 337 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF611Q8N823 705 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 C15orf54Q8N8G6 183 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR10A7Q8NGE5 316 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 OR5J2Q8NH18 312 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PINX1Q96BK5 328 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF385AQ96PM9 386 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 ADGRL4Q9HBW9 690 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 PARD6AQ9NPB6 346 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 DHCR7Q9UBM7 475 aaKnown RBP8.23□□□□□ -1.09
SNHG3-201ENST00000413987 TNFSF18Q9UNG2 199 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 V9GY05 133 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 SEC16AO15027 2179 aa8.23□□□□□ -1.09
SNHG3-201ENST00000413987 A0A1W2PPK0 400 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 RIIAD1A6NNX1 92 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 H7C417 338 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 BHLHE40O14503 412 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 PHYHO14832 338 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 LINC00614P0C842 121 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 DLK1P80370 383 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 PRR5P85299 388 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 AKIRIN2Q53H80 203 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 RPTNQ6XPR3 784 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 IL34Q6ZMJ4 242 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF561Q8N587 486 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 OR13C5Q8NGS8 318 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 NT5CQ8TCD5 201 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 NAT6Q93015 286 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 DERL3Q96Q80 235 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 TNFRSF13CQ96RJ3 184 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 MCHR1Q99705 422 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 RSG1Q9BU20 258 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 SMCO4Q9NRQ5 59 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ASF1BQ9NVP2 202 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 METTL1Q9UBP6 276 aaKnown RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 MTFP1Q9UDX5 166 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ADAM29Q9UKF5 820 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 SLC35A3Q9Y2D2 325 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 FAM96BQ9Y3D0 163 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 KIF26BQ2KJY2 2108 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 CCDC88CQ9P219 2028 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 IGHV5-10-1A0A0J9YXX1 117 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ZC3H12DA2A288 527 aaKnown RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 OR5H14A6NHG9 310 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 TM4SF5O14894 197 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 LDB3O75112 727 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 SCGNO76038 276 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms