RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PKIBQ9C010 78 aa12.55□□□□□ -0.4
TPM1-207ENST00000403994 H0YAE9 185 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 SYT7O43581 403 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 SULT1C4O75897 302 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 PRDX2P32119 198 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 KRTAP10-3P60369 221 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 ISL1P61371 349 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 ERVK11-1P61568 191 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 RPL31P62899 125 aaKnown RBP12.54□□□□□ -0.4
TPM1-207ENST00000403994 IL24Q13007 206 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 TMED1Q13445 227 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 Q6ZSV7 163 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 C17orf50Q8WW18 174 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 RFKQ969G6 155 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPM1-207ENST00000403994 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
TPM1-207ENST00000403994 PRKDCP78527 4128 aaKnown RBP12.53□□□□□ -0.4
TPM1-207ENST00000403994 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 EI24O14681 340 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ALPLP05186 524 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ATP6V1E1P36543 226 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 PROK1P58294 105 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ZNF85Q03923 595 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ZNF273Q14593 569 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 MIDNQ504T8 468 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 FAM220AQ7Z4H9 259 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ANGPTL5Q86XS5 388 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 ZSCAN4Q8NAM6 433 aaPredicted RBP12.53□□□□□ -0.4
TPM1-207ENST00000403994 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
TPM1-207ENST00000403994 AJUBAQ96IF1 538 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 IMPAD1Q9NX62 359 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 GNG8Q9UK08 70 aa12.53□□□□□ -0.4
TPM1-207ENST00000403994 H3BNX3 289 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
TPM1-207ENST00000403994 CLPXO76031 633 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 UBCP0CG48 685 aaKnown RBP12.52□□□□□ -0.41
TPM1-207ENST00000403994 CCL3L1P16619 93 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 TP53I3Q53FA7 332 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 ASCC1Q8N9N2 400 aaKnown RBP12.52□□□□□ -0.41
TPM1-207ENST00000403994 OR4M1Q8NGD0 313 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 USE1Q9NZ43 259 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 SLC7A11Q9UPY5 501 aa12.52□□□□□ -0.41
TPM1-207ENST00000403994 SF3B6Q9Y3B4 125 aaKnown RBP12.52□□□□□ -0.41
TPM1-207ENST00000403994 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 F8VVB4 439 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 F8VWA3 439 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 H3BUX3 64 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 ENTPD6O75354 484 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 TK1P04183 234 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 PIPP12273 146 aaPredicted RBP12.51□□□□□ -0.41
TPM1-207ENST00000403994 BMXP51813 675 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 KPNB1Q14974 876 aaKnown RBP12.51□□□□□ -0.41
TPM1-207ENST00000403994 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 CCDC54Q8NEL0 328 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 UBE2FQ969M7 185 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 FAM234AQ9H0X4 552 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 C16orf95Q9H693 158 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 ORC6Q9Y5N6 252 aa12.51□□□□□ -0.41
TPM1-207ENST00000403994 E9PQ18 207 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 K7N7A8 449 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 M0QZ24 198 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 KCNAB3O43448 404 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 ZNF737O75373 536 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 TSPAN9O75954 239 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 COX7A1P24310 79 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 TGFBR2P37173 567 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 DLX6P56179 175 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 ACTC1P68032 377 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 ACTA1P68133 377 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 COL10A1Q03692 680 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 ZNF782Q6ZMW2 699 aaPredicted RBP12.5□□□□□ -0.41
TPM1-207ENST00000403994 SLC25A26Q70HW3 274 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 RDH10Q8IZV5 341 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 PP6455Q8WZ26 134 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 C10orf35Q96D05 121 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 ADI1Q9BV57 179 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 IL36RNQ9UBH0 155 aa12.5□□□□□ -0.41
TPM1-207ENST00000403994 J3QRE1 110 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 TIMM23O14925 209 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 PAX6P26367 422 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 ALDH3A2P51648 485 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 FUT6P51993 359 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 SNRPGP62308 76 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms