RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CFL2Q9Y281 166 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 ORC6Q9Y5N6 252 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 S4R3C0 116 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 BRCA1P38398 1863 aaKnown RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 AHDC1Q5TGY3 1603 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGLV2-18A0A075B6J9 118 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGLV3-12A0A075B6K2 115 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRAV40A0A0B4J280 105 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGKV1-6A0A0C4DH72 117 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 CEACAM18A8MTB9 384 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 MYL12BO14950 172 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 NDUFS5O43920 106 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 SCN2BO60939 215 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 CNMDO75829 334 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 RBBP9O75884 186 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 PCK1P35558 622 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 UGT2B10P36537 528 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 RGS6P49758 472 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 KRTAP10-8P60410 259 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 DSTNP60981 165 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 TSPAN5P62079 268 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 PPP1CAP62136 330 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 SKP1P63208 163 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 KDSRQ06136 332 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 STX4Q12846 297 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 PMS2P3Q13401 168 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ACTL10Q5JWF8 245 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRMT10CQ7L0Y3 403 aaKnown RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 NEGR1Q7Z3B1 354 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 PDPNQ86YL7 162 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 H1FOOQ8IZA3 346 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR7G1Q8NGA0 311 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF420Q8TAQ5 688 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 RTN4IP1Q8WWV3 396 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 LRRC45Q96CN5 670 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ADTRPQ96IZ2 230 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ARL5BQ96KC2 179 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF75AQ96N20 296 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 HDHD2Q9H0R4 259 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 PLEKHA1Q9HB21 404 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 TMBIM4Q9HC24 238 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 RAB23Q9ULC3 237 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 ACOT9Q9Y305 439 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 WIF1Q9Y5W5 379 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 URGCP-MRPS24S4R325 110 aa2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 KIF26AQ9ULI4 1882 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P17-201ENST00000403495 LRPPRCP42704 1394 aaKnown RBP2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 TOR1AO14656 332 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 MMP7P09237 267 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR5AL1P0C617 328 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 GIMD1P0DJR0 217 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 SYT1P21579 422 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 P2RY2P41231 377 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 MAGEA6P43360 314 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 ADIGQ0VDE8 80 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 LAMTOR4Q0VGL1 99 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 SLAMF1Q13291 335 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 PMVKQ15126 192 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 HHATQ5VTY9 493 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 RESP18Q5W5W9 173 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 AHSA2Q719I0 299 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 PRNTQ86SH4 94 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 LRRC6Q86X45 466 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 NELFCDQ8IXH7 590 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 SLC25A29Q8N8R3 303 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR2M7Q8NG81 312 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 DOK4Q8TEW6 326 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 DDI1Q8WTU0 396 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 IFT81Q8WYA0 676 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 SNF8Q96H20 258 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 CTRCQ99895 268 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF717Q9BY31 904 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 UPF3BQ9BZI7 483 aaKnown RBP2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 LINC00574Q9H8X3 128 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 UBAP1Q9NZ09 502 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 MAT2BQ9NZL9 334 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 ATP6V1DQ9Y5K8 247 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 FADS3Q9Y5Q0 445 aa2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 V9GYY5 206 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P17-201ENST00000403495 ISPDA4D126 451 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 SMLR1H3BR10 107 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 GOLGA8RI6L899 631 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 M0R1B8 84 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 SULT1C2O00338 296 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNF593O00488 134 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 CBR3O75828 277 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 TNFAIP8O95379 198 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 BRI3O95415 125 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 SLC35E2BP0CK96 405 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 NTF3P20783 257 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 PSMB6P28072 239 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 PSMB5P28074 263 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 CD40LGP29965 261 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 TPBGQ13641 420 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 GUSBP1Q15486 140 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 MAPRE2Q15555 327 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR4D1Q15615 310 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 TTC32Q5I0X7 151 aa2.15□□□□□ -2.07
HMGB1P17-201ENST00000403495 DNLZQ5SXM8 178 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms