RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 KRT72Q14CN4 511 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SNCBQ16143 134 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SMIM21Q3B7S5 101 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FTMTQ8N4E7 242 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RNF148Q8N7C7 305 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 NDNFQ8TB73 568 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PYURFQ96I23 114 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RBM14Q96PK6 669 aaKnown RBP9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HIST1H2AAQ96QV6 131 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FGFR1OP2Q9NVK5 253 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SCOCQ9UIL1 159 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PSMB11A5LHX3 300 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 J3QT63 122 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR2F2O95006 317 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SOX14O95416 240 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 APOC1P02654 83 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MYCNOSP40205 109 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HAAOP46952 286 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 NUDT2P50583 147 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HCCSP53701 268 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SMIM11AP58511 58 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 DCTN2Q13561 401 aaKnown RBP9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RASSF6Q6ZTQ3 369 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 C16orf82Q7Z2V1 217 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SBSPONQ8IVN8 264 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR52L1Q8NGH7 329 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR52N4Q8NGI2 321 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RP9Q8TA86 221 aaKnown RBP9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 TEAD3Q99594 435 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HOPXQ9BPY8 73 aaPredicted RBP9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IL36RNQ9UBH0 155 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SAMD4AQ9UPU9 718 aaKnown RBP9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LYVE1Q9Y5Y7 322 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PQLC2LA1A4F0 135 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 NXPH2O95156 264 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HMGA2P52926 109 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 EDDM3BP56851 147 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PSME3P61289 254 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PLCXD3Q63HM9 321 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 UNQ9370/PRO34162Q6UXP9 181 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HACD2Q6Y1H2 254 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ANGPTL5Q86XS5 388 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IQCF1Q8N6M8 205 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZNF676Q8N7Q3 588 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ASCC1Q8N9N2 400 aaKnown RBP9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 KLHL30-AS1Q8NEE0 82 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OTOSQ8NHW6 89 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZNF714Q96N38 554 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MCRIP2Q9BUT9 160 aaKnown RBP9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MYLK2Q9H1R3 596 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 TMEM133Q9H2Q1 129 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 NIPAL2Q9H841 368 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 GORASP2Q9H8Y8 452 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 VIPAS39Q9H9C1 493 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 GPR84Q9NQS5 396 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 GPR173Q9NS66 373 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SLC22A13Q9Y226 551 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM172BPA6NC97 362 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A6NIN4 97 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PSMD9O00233 223 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RAMP3O60896 148 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IGHA1P01876 353 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LYNP07948 512 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MPZP25189 248 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HTR1DP28221 377 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CHATP28329 748 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IFNGR2P38484 337 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MAP2K3P46734 347 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR3A4PP47883 348 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 TMEM42Q69YG0 159 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LCNL1Q6ZST4 164 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SHFQ7M4L6 423 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR51D1Q8NGF3 324 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM81AQ8TBF8 368 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR51E1Q8TCB6 317 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 THEM6Q8WUY1 208 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CLEC7AQ9BXN2 247 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IGKV1-27A0A075B6S5 117 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A0A0U1RQV5 110 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PSPNO60542 156 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LYL1P12980 280 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms