RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 KNTC1P50748 2209 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 PATE3B3GLJ2 98 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 ZNF93P35789 620 aaPredicted RBP12.36□□□□□ -0.43
ATG3-202ENST00000402314 ZNF84P51523 738 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 SURF2Q15527 256 aaPredicted RBP12.36□□□□□ -0.43
ATG3-202ENST00000402314 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
ATG3-202ENST00000402314 FAM57BQ71RH2 274 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 OR8B12Q8NGG6 310 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 FAM213BQ8TBF2 198 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 THRSPQ92748 146 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 MR1Q95460 341 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 CDC6Q99741 560 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 IER2Q9BTL4 223 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 ABHD14AQ9BUJ0 271 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 PARPBPQ9NWS1 579 aa12.36□□□□□ -0.43
ATG3-202ENST00000402314 MEGF11A6BM72 1044 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 PNLIPRP3Q17RR3 467 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 ZNF385CQ66K41 422 aaPredicted RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 NUDT19A8MXV4 375 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 CFIP05156 583 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 ZNF239Q16600 458 aaKnown RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 HLA-BQ31612 363 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 P4HA3Q7Z4N8 544 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 TOMM40LQ969M1 308 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 HCKP08631 526 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 CCL4P13236 92 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 OMGP23515 440 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 SNCAP37840 140 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 TMEM50BP56557 158 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 CLDN17P56750 224 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 RPS23P62266 143 aaKnown RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 UBAC2Q8NBM4 344 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 NOXO1Q8NFA2 376 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 OR5L2Q8NGL0 311 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 OR2AJ1Q8NGZ0 328 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
ATG3-202ENST00000402314 HDHD3Q9BSH5 251 aaPredicted RBP12.35□□□□□ -0.43
ATG3-202ENST00000402314 SLC34A2O95436 690 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 IGHG1P01857 330 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 CD37P11049 281 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ZNF17P17021 662 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ZNF20P17024 532 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ZNF43P17038 809 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 NOVA1P51513 510 aaKnown RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 SNU13P55769 128 aaKnown RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 CCL20P78556 96 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 RSU1Q15404 277 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 USF2Q15853 346 aaPredicted RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 HAGHQ16775 308 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 PHYHD1Q5SRE7 291 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 LYSMD4Q5XG99 296 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 NSUN5P2Q63ZY6 315 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 LRRC18Q8N456 261 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 POC1AQ8NBT0 407 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 CNTNAP3Q9BZ76 1288 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATG3-202ENST00000402314 PRDM6Q9NQX0 595 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ZDHHC8Q9ULC8 765 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 CST4P01036 141 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 IFNA17P01571 189 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 FABP4P15090 132 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 RGS19P49795 217 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 QRFPP83859 136 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 NHLH2Q02577 135 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 ZNF283Q8N7M2 679 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 WFDC1Q9HC57 220 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 RAB18Q9NP72 206 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
ATG3-202ENST00000402314 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
ATG3-202ENST00000402314 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 F5H5K5 113 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 NXPH3O95157 252 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 SLC6A9P48067 706 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 RAB5CP51148 216 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 GABREP78334 506 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 OR5AS1Q8N127 324 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
ATG3-202ENST00000402314 LPAR5Q9H1C0 372 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms