RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.24□□□□□ -0.45
APOB-202ENST00000399256 ZNF441Q8N8Z8 693 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 PGAM5Q96HS1 289 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 LYZL4Q96KX0 146 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 PNRC2Q9NPJ4 139 aaKnown RBP12.24□□□□□ -0.45
APOB-202ENST00000399256 GAR1Q9NY12 217 aaKnown RBP12.24□□□□□ -0.45
APOB-202ENST00000399256 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 B3GALT1Q9Y5Z6 326 aa12.24□□□□□ -0.45
APOB-202ENST00000399256 PCDH15Q96QU1 1955 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 NPIPB13A6NJU9 1138 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 NPIPB4C9JG80 1138 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 CXCL1P09341 107 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 UBE2V2Q15819 145 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 ABCA11PQ4W5N1 156 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 UEVLDQ8IX04 471 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 ALKBH4Q9NXW9 302 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 NSG1A0A0A6YYJ2 146 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 VSTM2BA6NLU5 285 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 CDRT15L2A8MXV6 281 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 EFNA2O43921 213 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 LMO1P25800 156 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 MAS1LP35410 378 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 TMEM187Q14656 261 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 FBXW12Q6X9E4 464 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 DTX1Q86Y01 620 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 OR5L1Q8NGL2 311 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 SGK3Q96BR1 496 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 RAB39BQ96DA2 213 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
APOB-202ENST00000399256 CYP8B1Q9UNU6 501 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
APOB-202ENST00000399256 ZNF850A8MQ14 1090 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 H3BQ15 152 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 PGA4P0DJD7 388 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 PGA3P0DJD8 388 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ZNF43P17038 809 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 CCL1P22362 96 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 MYBPHQ13203 477 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 SMAD4Q13485 552 aaKnown RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 SLC38A9Q8NBW4 561 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 Q8WTZ3 238 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 FAAP24Q9BTP7 215 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 VN1R1Q9GZP7 353 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 NAA60Q9H7X0 242 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ANXA10Q9UJ72 324 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 TLCD2A6NGC4 264 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 H0YL77 283 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 K7N7A8 449 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 IGHG1P01857 330 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ZNF728P0DKX0 622 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 FBLP22087 321 aaKnown RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 ECI1P42126 302 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 NOVA1P51513 510 aaKnown RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 HAGHQ16775 308 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 DYRK2Q92630 601 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 NELFAQ9H3P2 528 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
APOB-202ENST00000399256 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 F5H5K5 113 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 CHAF1BQ13112 559 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 GPR157Q5UAW9 335 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 STT3BQ8TCJ2 826 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 NTNG2Q96CW9 530 aa12.22□□□□□ -0.45
APOB-202ENST00000399256 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.45
APOB-202ENST00000399256 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.45
APOB-202ENST00000399256 AFF3P51826 1226 aaKnown RBP12.21□□□□□ -0.45
APOB-202ENST00000399256 UBE2KP61086 200 aa12.21□□□□□ -0.45
APOB-202ENST00000399256 TM2D1Q9BX74 207 aa12.21□□□□□ -0.45
APOB-202ENST00000399256 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
APOB-202ENST00000399256 MYO7BQ6PIF6 2116 aa12.21□□□□□ -0.45
APOB-202ENST00000399256 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 ZNF814B7Z6K7 855 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 QDPRP09417 244 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 RNF224P0DH78 156 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 RNF4P78317 190 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 C17orf67Q0P5P2 114 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 BRICD5Q6PL45 260 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 C20orf196Q8IYI0 205 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 LFNGQ8NES3 379 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 OR11L1Q8NGX0 322 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 OR2G3Q8NGZ4 309 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 LMX1AQ8TE12 382 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 S100PBPQ96BU1 408 aa12.21□□□□□ -0.46
APOB-202ENST00000399256 FAM221AA4D161 298 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 CSNK1A1P48729 337 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms