RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CCDC36Q8IYA8 594 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 OR5M9Q8NGP3 310 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 OR51F2Q8NH61 342 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 CASTOR1Q8WTX7 329 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 PIGCQ92535 297 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 ZDHHC11Q9H8X9 412 aa15.34■□□□□ 0.05
HLA-DQB1-204ENST00000399084 TRGV5A0A0B4J1U4 118 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SS18L1O75177 396 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PDCD6O75340 191 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PDGFAP04085 211 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 CRHP06850 196 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PET100P0DJ07 73 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FUT3P21217 361 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RFC3P40938 356 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ZNF766Q5HY98 468 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SIGIRRQ6IA17 410 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 CLEC18BQ6UXF7 455 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 KCTD9Q7L273 389 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 COMMD7Q86VX2 200 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 OR5L1Q8NGL2 311 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 TMEM230Q96A57 120 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 CHMP1AQ9HD42 196 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ZNF701Q9NV72 531 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 MEMO1Q9Y316 297 aa15.33■□□□□ 0.04
HLA-DQB1-204ENST00000399084 C5orf51A6NDU8 294 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 BCL2L11O43521 198 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SPRY1O43609 319 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ARG2P78540 354 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SPEM2Q0P670 501 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 TAF9Q16594 264 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 CEACAM21Q3KPI0 293 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ZNF660Q6AZW8 331 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 MRPL21Q7Z2W9 205 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RTN4RL2Q86UN3 420 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 CCDC28AQ8IWP9 274 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 LDAHQ9H6V9 325 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 KNTC1P50748 2209 aa15.32■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PQLC2LA1A4F0 135 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ANGPTL7O43827 346 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SERPINF1P36955 418 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RBM11P57052 281 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RAB1AP62820 205 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 NKAPLQ5M9Q1 402 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 Q6ZS49 121 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 MKXQ8IYA7 352 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 OR5A2Q8NGI9 324 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PIK3IP1Q96FE7 263 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 WDYHV1Q96HA8 205 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SEC22AQ96IW7 307 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 POM121L2Q96KW2 1035 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PLK3Q9H4B4 646 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RHOFQ9HBH0 211 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ST3GAL6Q9Y274 331 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SESN1Q9Y6P5 492 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 IFNA2P01563 188 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 IGHV3-9P01782 118 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 NMBP08949 121 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 OR5H8P0DN80 308 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 LIPCP11150 499 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 LYL1P12980 280 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 UCP3P55916 312 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FBXW9Q5XUX1 488 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RGS7BPQ6MZT1 257 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 LINC00596Q86U02 117 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SGPP2Q8IWX5 399 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PDZD9Q8IXQ8 264 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FBXL14Q8N1E6 418 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 LRRC20Q8TCA0 184 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 C2orf50Q96LR7 162 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FAAP24Q9BTP7 215 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 DNTTIP1Q9H147 329 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ZNF286AQ9HBT8 521 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 C1orf123Q9NWV4 160 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PFDN2Q9UHV9 154 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ZNF230Q9UIE0 474 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 AK3Q9UIJ7 227 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 MPC1Q9Y5U8 109 aa15.31■□□□□ 0.04
HLA-DQB1-204ENST00000399084 IGKV1-12A0A0C4DH73 117 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 C5orf49A4QMS7 147 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 POM121CA8CG34 1229 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FAM25EA8MYX2 175 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 IGKV1D-12P01611 117 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 FCGR3AP08637 254 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PGAM2P15259 253 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RPS2P15880 293 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 NUP62P37198 522 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SUPT4H1P63272 117 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 DMRTC1Q5HYR2 192 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 OR10AD1Q8NGE0 317 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 GMPPAQ96IJ6 420 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 HIST1H2AAQ96QV6 131 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 RDH8Q9NYR8 311 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 KCNIP3Q9Y2W7 256 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 AHCTF1Q8WYP5 2266 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 MYO7BQ6PIF6 2116 aa15.3■□□□□ 0.04
HLA-DQB1-204ENST00000399084 hCG_1807616A0A1W2PRN6 198 aa15.29■□□□□ 0.04
HLA-DQB1-204ENST00000399084 ARGFXA6NJG6 315 aa15.29■□□□□ 0.04
HLA-DQB1-204ENST00000399084 SLC22A20A6NK97 555 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms