RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CEACAM18A8MTB9 384 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 F5H0A9 414 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ACAA1P09110 424 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L2P0CJ85 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L3P0CJ86 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L4P0CJ87 422 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L5P0CJ88 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L6P0CJ89 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L7P0CJ90 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IRF2P14316 349 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SRMP19623 302 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GALP22466 123 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FGF9P31371 208 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MDH2P40926 338 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NPBWR2P48146 333 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GMFBP60983 142 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PPP3R1P63098 170 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 KRTAP1-1Q07627 177 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 HSD17B12Q53GQ0 312 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 STUMQ69YW2 141 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C22orf42Q6IC83 251 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4L9Q6RFH8 374 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DEFB108BQ8NET1 73 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PHYHIPQ92561 330 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TIMD4Q96H15 378 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C1orf147Q96MC9 270 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TXNL4BQ9NX01 149 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IL36RNQ9UBH0 155 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CTSZQ9UBR2 303 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CKLFQ9UBR5 152 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DUX4Q9UBX2 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 STUB1Q9UNE7 303 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 POLDIP2Q9Y2S7 368 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 KDM4BO94953 1096 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GYPAP02724 150 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SFTPBP07988 381 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 BCL3P20749 454 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF93P35789 620 aaPredicted RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TGFBR1P36897 503 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SEC61A1P61619 476 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ACP7Q6ZNF0 438 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SATL1Q86VE3 508 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR5T2Q8NGG2 359 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR4D6Q8NGJ1 314 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF671Q8TAW3 534 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C1orf159Q96HA4 380 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CEP19Q96LK0 163 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GAL3ST1Q99999 423 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF665Q9H7R5 613 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CNTD2Q9H8S5 307 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PATZ1Q9HBE1 687 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SNTG1Q9NSN8 517 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 RBFOX1Q9NWB1 397 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NLKQ9UBE8 527 aa10.36□□□□□ -0.75
HLA-DQB1-203ENST00000399082 F8P00451 2351 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IGKV1D-17A0A075B6S4 117 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SMAD7O15105 426 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IGHV4-31P0DP07 118 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CALCBP10092 127 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PSG2P11465 335 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SELLP14151 372 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GLRA1P23415 457 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PTGFRP43088 359 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CEBPDP49716 269 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C1orf100Q5SVJ3 147 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF841Q6ZN19 808 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MUC20Q8N307 709 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FGFRL1Q8N441 504 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NKAIN3Q8N8D7 197 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZSCAN4Q8NAM6 433 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 Q8NFD4 153 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PXT1Q8NFP0 134 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR51F2Q8NH61 342 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ANGPTL6Q8NI99 470 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TNFAIP8L1Q8WVP5 186 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CHCHD6Q9BRQ6 235 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CENPOQ9BU64 300 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SMURF1Q9HCE7 757 aa10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 EXOSC4Q9NPD3 245 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TRAV1-2A0A0B4J238 106 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 A0A0G2JK05 382 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms