RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SSX4O60224 188 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ERVK11-1P61568 191 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 HOXA4Q00056 320 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RAB11BQ15907 218 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 HES5Q5TA89 166 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 GLIPR1L1Q6UWM5 242 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 C1orf87Q8N0U7 546 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ZNF525Q8N782 197 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 TBC1D15Q8TC07 691 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 SLC25A46Q96AG3 418 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CEP19Q96LK0 163 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 HES4Q9HCC6 221 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 IL36GQ9NZH8 169 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 STEAP1Q9UHE8 339 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 NAV2Q8IVL1 2488 aa16.37■□□□□ 0.21
MAP1LC3A-203ENST00000397709 PDZD2O15018 2839 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 F8VVB4 439 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 F8VWA3 439 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 TRAPPC2LH3BP13 241 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BCL3P20749 454 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 NPBWR2P48146 333 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CROCCP3Q8IVE0 287 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 DGCR14Q96DF8 476 aaKnown RBP16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 METTL9Q9H1A3 318 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BATF3Q9NR55 127 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 GHRLQ9UBU3 117 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ING4Q9UNL4 249 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 NPTNQ9Y639 398 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ARID1AO14497 2285 aa16.36■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CLDN25C9JDP6 229 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 C3orf80F5H4A9 247 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 WNT9BO14905 357 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BPNT1O95861 308 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 SFTPBP07988 381 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 UBBP0CG47 229 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 SLC2A2P11168 524 aaPredicted RBP16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 PDLIM4P50479 330 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CLDN12P56749 244 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 TMEM33P57088 247 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 P2RY14Q15391 338 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 FAM201AQ5SY85 155 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 DNM1P46Q6ZS02 220 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 Q8IYB0 196 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BATF2Q8N1L9 274 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 Q8NFD4 153 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 S100A13Q99584 98 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BARHL1Q9BZE3 327 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 WDR13Q9H1Z4 485 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RHOFQ9HBH0 211 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RBFOX1Q9NWB1 397 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RASL12Q9NYN1 266 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 DAPK2Q9UIK4 370 aa16.35■□□□□ 0.21
MAP1LC3A-203ENST00000397709 TMEM127O75204 238 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ZNF780AO75290 641 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 FSTL3O95633 263 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CSF3P09919 207 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 GLRA1P23415 457 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 GIFP27352 417 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 CD80P33681 288 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RANBP1P43487 201 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 RSU1Q15404 277 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 DGUOKQ16854 277 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 TEX36Q5VZQ5 186 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ELP2Q6IA86 826 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 BOLLQ8N9W6 283 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 OR10K1Q8NGX5 313 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 DYNC2LI1Q8TCX1 351 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 FAM3DQ96BQ1 224 aa16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 ELL3Q9HB65 397 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3A-203ENST00000397709 PPIAL4EA0A075B759 164 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 A0A0B4J203 849 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 PPIAL4DF5H284 164 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 NXPH2O95156 264 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 PPIAL4FP0DN26 164 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 ARSBP15848 533 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 RORCP51449 518 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 BMXP51813 675 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 GMFBP60983 142 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 QRFPP83859 136 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 GPR176Q14439 515 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 CARTPTQ16568 116 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 ACP7Q6ZNF0 438 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 FAM58AQ8N1B3 248 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 OR51D1Q8NGF3 324 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 EMG1Q92979 244 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 KCNK15Q9H427 330 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 LIN7BQ9HAP6 207 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 PPIAL4AQ9Y536 164 aa16.33■□□□□ 0.2
MAP1LC3A-203ENST00000397709 A0A1W2PP11 408 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 OOEPA6NGQ2 149 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 TMEM14DPA8MWL7 114 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 LGALS8O00214 317 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 NDUFS8O00217 210 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 LDLRAD4O15165 306 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 PPIHO43447 177 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 ZNF205O95201 554 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 HTR3BO95264 441 aa16.32■□□□□ 0.2
MAP1LC3A-203ENST00000397709 IGHV2-70P01814 119 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms