RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 DKK2Q9UBU2 259 aa6.26□□□□□ -1.41
CASP4-201ENST00000393150 MPC1Q9Y5U8 109 aa6.26□□□□□ -1.41
CASP4-201ENST00000393150 IER3IP1Q9Y5U9 82 aa6.26□□□□□ -1.41
CASP4-201ENST00000393150 SEC14L6B5MCN3 397 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 CCL24O00175 119 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 AKR7A2O43488 359 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SNX3O60493 162 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 FCN3O75636 299 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ATP6V1G2O95670 118 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 IFNA6P05013 189 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SELLP14151 372 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 HSD11B1P28845 292 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 OR1E2P47887 323 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RASSF2P50749 326 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 INSL3P51460 131 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SLC18A1P54219 525 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 MTPNP58546 118 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RPL23AP62750 156 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 CSNK2BP67870 215 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SMIM21Q3B7S5 101 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 KRTAP27-1Q3LI81 207 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 PAGE3Q5JUK9 113 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 HCP5Q6MZN7 132 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ADAMTSL5Q6ZMM2 481 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNF782Q6ZMW2 699 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 TMPRSS11FQ6ZWK6 438 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 MBOAT2Q6ZWT7 520 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 OR2W3Q7Z3T1 314 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 LHFPL4Q7Z7J7 247 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 NAA40Q86UY6 237 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNF695Q8IW36 515 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNF561Q8N587 486 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ANKRD42Q8N9B4 389 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNRF1Q8ND25 227 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ANGPTL6Q8NI99 470 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 CREB3L1Q96BA8 519 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RNF170Q96K19 258 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 OR52B2Q96RD2 323 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 CGREF1Q99674 301 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 TMEM120AQ9BXJ8 343 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 GON7Q9BXV9 100 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 IKZF5Q9H5V7 419 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 CENPMQ9NSP4 180 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 VNN3Q9NY84 501 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RASL12Q9NYN1 266 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 CYB5R1Q9UHQ9 305 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 B9D1Q9UPM9 204 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 FAM32AQ9Y421 112 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 SLC22A2O15244 555 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RBP4P02753 201 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNF20P17024 532 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 HOXB9P17482 250 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 HTR1DP28221 377 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 MNDAP41218 407 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 GPR4P46093 362 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 MRPL19P49406 292 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 PRKXP51817 358 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 GRB2P62993 217 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 ELF3P78545 371 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 RAB32Q13637 225 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SNAPC1Q16533 368 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RSPO1Q2MKA7 263 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 SNAI3Q3KNW1 292 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 LRRC23Q53EV4 343 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 FAM209BQ5JX69 171 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ZNF770Q6IQ21 691 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 LCN8Q6JVE9 175 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 FAM122BQ7Z309 247 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 SATL1Q86VE3 508 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 C11orf53Q8IXP5 236 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 FAM86B1Q8N7N1 296 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 OR4M1Q8NGD0 313 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 OR8U1Q8NH10 309 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RPL3LQ92901 407 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 SEH1LQ96EE3 360 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 REEP6Q96HR9 211 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 ERMAPQ96PL5 475 aaPredicted RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 SLC25A33Q9BSK2 321 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 TLNRD1Q9H1K6 362 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 WDR13Q9H1Z4 485 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 RGCCQ9H4X1 137 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 KAT8Q9H7Z6 458 aaKnown RBP6.25□□□□□ -1.41
CASP4-201ENST00000393150 NRIP3Q9NQ35 241 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 GLS2Q9UI32 602 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 LYVE1Q9Y5Y7 322 aa6.25□□□□□ -1.41
CASP4-201ENST00000393150 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
CASP4-201ENST00000393150 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 SERPINE3A8MV23 424 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.24□□□□□ -1.41
CASP4-201ENST00000393150 IMPA2O14732 288 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 LDLRAD4O15165 306 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 SNNO75324 88 aaPredicted RBP6.24□□□□□ -1.41
CASP4-201ENST00000393150 OR2F2O95006 317 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 SERPINA1P01009 418 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 FAM106CPP0CH98 169 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 ZNF728P0DKX0 622 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 PSG2P11465 335 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 TNFRSF1BP20333 461 aa6.24□□□□□ -1.41
CASP4-201ENST00000393150 CEACAM3P40198 252 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms