RNA–Protein interactions for RNA: ENST00000391141.1

SNORA53-201, Transcript of small nucleolar RNA, H/ACA box 53, humanhuman

BASIC

Gene SNORA53, Length 249 nt, Biotype snoRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA53-201ENST00000391141 PRRC1Q96M27 445 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 NAPGQ99747 312 aaPredicted RBP-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 ACTR3CQ9C0K3 210 aaPredicted RBP-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 OR2D2Q9H210 308 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 PORCNQ9H237 461 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 VPS37BQ9H9H4 285 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 NAGKQ9UJ70 344 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 AP1M2Q9Y6Q5 423 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 COL18A1P39060 1754 aa-0.35□□□□□ -2.47
SNORA53-201ENST00000391141 C9JQL5 133 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 H7C0C1 242 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 TP53I11O14683 189 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 NOL3O60936 208 aaKnown RBP-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 B3GALNT1O75752 331 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 OR2J3O76001 311 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 ZNF7P17097 686 aaPredicted RBP-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 HLA-GP17693 338 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 ATP5OP48047 213 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 PLCXD2Q0VAA5 305 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 DEFB115Q30KQ5 88 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 C16orf87Q6PH81 154 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 UNQ6190/PRO20217Q6UXQ8 127 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 RGS9BPQ6ZS82 235 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 VN1R4Q7Z5H5 301 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 COA5Q86WW8 74 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 OR1S1Q8NH92 325 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 TMBIM1Q969X1 311 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 SPACA5Q96QH8 159 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 DOK5Q9P104 306 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 VAX2Q9UIW0 290 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 VPREB3Q9UKI3 123 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 NDRG2Q9UN36 371 aaKnown RBP-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 RCL1Q9Y2P8 373 aaKnown RBP-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 ENPP4Q9Y6X5 453 aa-0.36□□□□□ -2.47
SNORA53-201ENST00000391141 SCN9AQ15858 1988 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 TRBV24-1A0A075B6N3 115 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 A6NED7 52 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 IGKV2D-40P01614 121 aaPredicted RBP-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 CDK1P06493 297 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 ZNF24P17028 368 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 TNNI1P19237 187 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 RAB5AP20339 215 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 MAGEA12P43365 314 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 IRF8Q02556 426 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 TIMM23BQ5SRD1 257 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 PRAMEF5Q5TYX0 476 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 PRAMEF6Q5VXH4 476 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 OR2T5Q6IEZ7 315 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 SPESP1Q6UW49 350 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 OR9K2Q8NGE7 335 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 OR2T29Q8NH02 315 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 OR51F2Q8NH61 342 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 ELMO1Q92556 727 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 CALN1Q9BXU9 219 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 STMN4Q9H169 189 aaPredicted RBP-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 TMEM100Q9NV29 134 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 DDX18Q9NVP1 670 aaKnown RBP-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 HYPKQ9NX55 129 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 TAC3Q9UHF0 121 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 CYB5R1Q9UHQ9 305 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 KLF13Q9Y2Y9 288 aaPredicted RBP-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 PLEKHG2Q9H7P9 1386 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 ZNF462Q96JM2 2506 aa-0.37□□□□□ -2.47
SNORA53-201ENST00000391141 A0A0J9YX75 114 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 MYL12BO14950 172 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 LECT2O14960 151 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 EIF3HO15372 352 aaKnown RBP eCLIP-0.38□□□□□ -2.472e-7■■□□□ 11.6
SNORA53-201ENST00000391141 PDYNP01213 254 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 KRTAP2-3P0C7H8 128 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 MSR1P21757 451 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 BCKDHBP21953 392 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 PAX6P26367 422 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 HTR2CP28335 458 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 RRM2P31350 389 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 HSDL1Q3SXM5 330 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 CCDC183Q5T5S1 534 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 MLIPQ5VWP3 458 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 TTC23LQ6PF05 361 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 FAM231DQ6ZW35 169 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 RBM45Q8IUH3 476 aaKnown RBP-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 C10orf126Q8N4M7 172 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 ASZ1Q8WWH4 475 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 RAB1CQ92928 201 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 ZNF514Q96K75 400 aaPredicted RBP-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 UBE2E2Q96LR5 201 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 GPR21Q99679 349 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 Q9BRP9 147 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 KRTAP2-4Q9BYR9 128 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 KRTAP2-1Q9BYU5 128 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 ZYG11BQ9C0D3 744 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 BEX1Q9HBH7 125 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 ANGPT4Q9Y264 503 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 DENND4BO75064 1496 aaPredicted RBP-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 PTPRBP23467 1997 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 DMBT1Q9UGM3 2413 aaPredicted RBP-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 SLX4Q8IY92 1834 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 ATAD5Q96QE3 1844 aa-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 NPHP4O75161 1426 aaPredicted RBP-0.38□□□□□ -2.47
SNORA53-201ENST00000391141 TRAV8-6A0A0B4J262 113 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms