RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 TMEM175Q9BSA9 504 aa-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ZYG11BQ9C0D3 744 aa-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 STMN4Q9H169 189 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CYSTM1Q9H1C7 97 aa-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TAC3Q9UHF0 121 aa-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 VPREB3Q9UKI3 123 aa-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SOX21Q9Y651 276 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1040P-201ENST00000383974 UBN2Q6ZU65 1347 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 NPHP4O75161 1426 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TSPAN11A1L157 253 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 HCRTO43612 131 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SMC2O95347 1197 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GUCA1CO95843 209 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CD160O95971 181 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SLC2A3P11169 496 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 NCF2P19878 526 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 HTR2CP28335 458 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 RFC3P40938 356 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 AP1S2P56377 157 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TMEM241Q24JQ0 296 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 FAM201AQ5SY85 155 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 RWDD4Q6NW29 188 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 VN1R4Q7Z5H5 301 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 RBM45Q8IUH3 476 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 FAM9BQ8IZU0 186 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 C10orf126Q8N4M7 172 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TTC29Q8NA56 475 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 NT5C3BQ969T7 300 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 DDIT4LQ96D03 193 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CENPKQ9BS16 269 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MFSD1Q9H3U5 465 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 DOK5Q9P104 306 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CYB5R1Q9UHQ9 305 aa-0.12□□□□□ -2.43
RNU6-1040P-201ENST00000383974 RTEL1-TNFRSF6BF6WH68 1400 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TRAV8-6A0A0B4J262 113 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 HLA-AP01891 365 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 EIF2S2P20042 333 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GBX2P52951 348 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TRMT5Q32P41 509 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ELMO1Q92556 727 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 XPO6Q96QU8 1125 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SLC7A5P2Q9GIP4 190 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 LRRC40Q9H9A6 602 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PXMP2Q9NR77 195 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TAS2R9Q9NYW1 312 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 RCL1Q9Y2P8 373 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TRPM6Q9BX84 2022 aa-0.13□□□□□ -2.43
RNU6-1040P-201ENST00000383974 IGLV3-9A0A075B6K5 115 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TRBV24-1A0A075B6N3 115 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 A0A0J9YX75 114 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SMCO3A2RU48 225 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TRAPPC3O43617 180 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 HUS1O60921 280 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR2A4O95047 310 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CLTAP09496 248 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR12D1P0DN82 309 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MYL2P10916 166 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ZNF7P17097 686 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MRPL19P49406 292 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TFDP2Q14188 446 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TPRXLQ17RH7 258 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 NIPAL1Q6NVV3 410 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 COA5Q86WW8 74 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 LINC00337Q8N6G1 96 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 NECAB1Q8N987 351 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR10P1Q8NGE3 313 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR4X1Q8NH49 305 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR51F2Q8NH61 342 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR2A7Q96R45 310 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MTG1Q9BT17 334 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MRPL20Q9BYC9 149 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 UCK2Q9BZX2 261 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SRRQ9GZT4 340 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 XKR8Q9H6D3 395 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PRSS16Q9NQE7 514 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 VAX2Q9UIW0 290 aa-0.14□□□□□ -2.43
RNU6-1040P-201ENST00000383974 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GOLGA8JA6NMD2 632 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 SH2D1AO60880 128 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 UPK1BO75841 260 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PDYNP01213 254 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 IGKV2D-40P01614 121 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GOLGA8HP0CJ92 632 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GTF2F2P13984 249 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 TAF7Q15545 349 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 C16orf87Q6PH81 154 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 GID4Q8IVV7 300 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ZBTB18Q99592 522 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 OR2D2Q9H210 308 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 ARV1Q9H2C2 271 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 DDX18Q9NVP1 670 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PTTG3PQ9NZH4 202 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PITPNC1Q9UKF7 332 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 KLF13Q9Y2Y9 288 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MRPS16Q9Y3D3 137 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 PTPRKQ15262 1439 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 MROH7Q68CQ1 1323 aa-0.15□□□□□ -2.43
RNU6-1040P-201ENST00000383974 CACNA1SQ13698 1873 aa-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms