RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 UBTD2Q8WUN7 234 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 HS3ST2Q9Y278 367 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TMSB15BA0A087X1C1 80 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 FGF17O60258 216 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 JUNBP17275 347 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 THBS4P35443 961 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 DPPA3Q6W0C5 159 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 VN1R1Q9GZP7 353 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ZNF576Q9H609 170 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 C6orf106Q9H6K1 298 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 C19orf53Q9UNZ5 99 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 NUP205Q92621 2012 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 DNAJC25-GNG10A0A024R161 153 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 GFYI3L273 518 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 FUT3P21217 361 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 COL8A1P27658 744 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 PPP1CCP36873 323 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 CDK5R1Q15078 307 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 FAM27D1Q5T7N8 215 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 METRNLQ641Q3 311 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 RTL10Q7L3V2 364 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MORN4Q8NDC4 146 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 NOXO1Q8NFA2 376 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ST8SIA1Q92185 356 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 APOBEC3DQ96AK3 386 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 RSG1Q9BU20 258 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 CACNG5Q9UF02 275 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 IGKV3D-15A0A087WSY6 115 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TRGV5A0A0B4J1U4 118 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 IGKV3-15P01624 115 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ZP3P21754 424 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ZNF137PP52743 207 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 GNG3P63215 75 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 UQCC3Q6UW78 93 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR2V1Q8NHB1 315 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 C16orf52Q8NHV5 167 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 STARD4Q96DR4 205 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 KTI12Q96EK9 354 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 ADAT3Q96EY9 351 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 SCMH1Q96GD3 660 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 DUSP21Q9H596 190 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 CSNK1G1Q9HCP0 422 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MOB4Q9Y3A3 225 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 CICQ96RK0 1608 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 DUXBA0A1W2PPF3 345 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 GSG1Q2KHT4 349 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 SLC25A30Q5SVS4 291 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 NCMAPQ5T1S8 102 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 HES3Q5TGS1 186 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 MRPL54Q6P161 138 aaKnown RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 DHRS4L2Q6PKH6 230 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 KMT5CQ86Y97 462 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 PTX4Q96A99 478 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 FAM53CQ9NYF3 392 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 MFSD2BA6NFX1 497 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 OOEPA6NGQ2 149 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 GSTZ1O43708 216 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 ADGRB2O60241 1585 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 ZGLP1P0C6A0 271 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 ZNF26P17031 533 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 RPS4Y1P22090 263 aaKnown RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 KIR2DS2P43631 304 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 DYNLT3P51808 116 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 OR4A47Q6IF82 309 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 OR10A7Q8NGE5 316 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 OR1F12Q8NHA8 337 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 ARRDC1-AS1Q9H2J1 176 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 RASL12Q9NYN1 266 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 SOX21Q9Y651 276 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 MT-CO3P00414 261 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 SPNP16150 400 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 BTF3P20290 206 aaKnown RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 FADS6Q8N9I5 356 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 VN1R2Q8NFZ6 395 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 MRGPRX4Q96LA9 322 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 PRRX2Q99811 253 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 ZNF552Q9H707 407 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 C3orf85A0A1B0GTC6 90 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 GNG7O60262 68 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 TSPAN12O95859 305 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 CA2P00918 260 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 TNFAIP6P98066 277 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 FUT7Q11130 342 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 LBHQ53QV2 105 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 SEZ6L2Q6UXD5 910 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 PTRH1Q86Y79 214 aaKnown RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 RASL11BQ9BPW5 248 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 F2RL2O00254 374 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 LMX1BO60663 402 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 PGA3P0DJD8 388 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 MYF5P13349 255 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 CLDN18P56856 261 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 BCL7CQ8WUZ0 217 aaPredicted RBP5.25□□□□□ -1.57
RFX3-204ENST00000382004 ARHGAP5-AS1Q96IT6 56 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 RAB40CQ96S21 281 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 FOXC2Q99958 501 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 PLA2G3Q9NZ20 509 aa5.25□□□□□ -1.57
RFX3-204ENST00000382004 OR6C3Q9NZP0 311 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms