RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DUX4L2P0CJ85 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L3P0CJ86 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L4P0CJ87 422 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L5P0CJ88 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L6P0CJ89 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L7P0CJ90 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 ADRA2CP18825 462 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 ATF1P18846 271 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 GATA3P23771 443 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 TGM4P49221 684 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 FUT6P51993 359 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 IKZF1Q13422 519 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 CDPF1Q6NVV7 123 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 RPL22L1Q6P5R6 122 aaKnown RBP7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4L9Q6RFH8 374 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-202ENST00000380747 BTNL3Q6UXE8 466 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 ZNF841Q6ZN19 808 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 ZNF573Q86YE8 665 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 BATF2Q8N1L9 274 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 FAM216BQ8N7L0 139 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 POC1AQ8NBT0 407 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 OR51A4Q8NGJ6 313 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 TSEN15Q8WW01 171 aaKnown RBP7.68□□□□□ -1.18
HMGN1-202ENST00000380747 RAB40AQ8WXH6 277 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 ST8SIA4Q92187 359 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 BORCS8Q96FH0 119 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 PDCD1LG2Q9BQ51 273 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 MRI1Q9BV20 369 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 PLCXD1Q9NUJ7 323 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 CNOT2Q9NZN8 540 aaKnown RBP7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DUX4Q9UBX2 424 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 DHDHQ9UQ10 334 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 POLDIP2Q9Y2S7 368 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 INSIG2Q9Y5U4 225 aa7.68□□□□□ -1.18
HMGN1-202ENST00000380747 PPIAL4CA0A0B4J2A2 164 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 OR2AT4A6NND4 320 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 PTGES3LE9PB15 166 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 DVL1O14640 695 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 TNFRSF13BO14836 293 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-202ENST00000380747 MYL12BO14950 172 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 NDUFB3O43676 98 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 NXPH2O95156 264 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 RPSAP08865 295 aaKnown RBP7.67□□□□□ -1.18
HMGN1-202ENST00000380747 PRKACBP22694 351 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 AZGP1P25311 298 aaKnown RBP7.67□□□□□ -1.18
HMGN1-202ENST00000380747 GABRA2P47869 451 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 HSPA13P48723 471 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 NPY4RP50391 375 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 ATP1B3P54709 279 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 RIPK1Q13546 671 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 C6orf141Q5SZD1 244 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 CD276Q5ZPR3 534 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 STUMQ69YW2 141 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 XAF1Q6GPH4 301 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 SLC36A1Q7Z2H8 476 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 CALHM1Q8IU99 346 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 TEX29Q8N6K0 151 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 ZFP41Q8N8Y5 198 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 OR13C9Q8NGT0 318 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 OR52N1Q8NH53 320 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 C12orf43Q96C57 262 aaKnown RBP7.67□□□□□ -1.18
HMGN1-202ENST00000380747 BABAM2Q9NXR7 383 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 SCN3BQ9NY72 215 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 RASL12Q9NYN1 266 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 NLKQ9UBE8 527 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 OPN4Q9UHM6 478 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 AUP1Q9Y679 476 aa7.67□□□□□ -1.18
HMGN1-202ENST00000380747 IGKV1-27A0A075B6S5 117 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 IGHV2-70DA0A0C4DH43 119 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 IGKV1-9A0A0C4DH69 117 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 PNMA8CA0A1B0GUJ8 204 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 C22orf46C9J442 243 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 OGG1O15527 345 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 CYB5AP00167 134 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 LALBAP00709 142 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 CDK1P06493 297 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 PGA5P0DJD9 388 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 PSG2P11465 335 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 AMY2BP19961 511 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 MYF6P23409 242 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 MPZP25189 248 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 C21orf33P30042 268 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-202ENST00000380747 VHLP40337 213 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 SOX2P48431 317 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 POU3F4P49335 361 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 RBP2P50120 134 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 MTCP1P56278 107 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 IL24Q13007 206 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 SMIM21Q3B7S5 101 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 CCDC58Q4VC31 144 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 ARMCX4Q5H9R4 360 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 ACP7Q6ZNF0 438 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 ZNF788Q6ZQV5 615 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 SLC25A26Q70HW3 274 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 UTS2BQ765I0 119 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 BTN2A1Q7KYR7 527 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 C1QL2Q7Z5L3 287 aa7.66□□□□□ -1.18
HMGN1-202ENST00000380747 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms