RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 SERPINE3A8MV23 424 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 C4orf51C9J302 202 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 LRP3O75074 770 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CSF2RBP32927 897 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 MESTQ5EB52 335 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 ZFP62Q8NB50 900 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 OR10P1Q8NGE3 313 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 TECTBQ96PL2 329 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SPTBN2O15020 2390 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CEP250Q9BV73 2442 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF32P17041 273 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 RAC3P60763 192 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 PHYHIPLQ96FC7 376 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CHRDL1Q9BU40 450 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SPRY1O43609 319 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 HPP00738 406 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 NTF3P20783 257 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 GABRA4P48169 554 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 KCNJ3P48549 501 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 PJVKQ0ZLH3 352 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 RPUSD4Q96CM3 377 aaKnown RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CIB3Q96Q77 187 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 CACNA1EQ15878 2313 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SEC14L6B5MCN3 397 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 H0Y8G0 127 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SELENOPP49908 381 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 FABP9Q0Z7S8 132 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 RGS7BPQ6MZT1 257 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SLC22A18ASQ8N1D0 253 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 SOX7Q9BT81 388 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF391Q9UJN7 358 aa13.35□□□□□ -0.27
NPHP4-201ENST00000378156 RD3LP0DJH9 198 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 GSK3AP49840 483 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SUB1P53999 127 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPHP4-201ENST00000378156 MPPED2Q15777 294 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 PMS2CLQ68D20 193 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 DGAT2L6Q6ZPD8 337 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 TSEN54Q7Z6J9 526 aaKnown RBP13.34□□□□□ -0.27
NPHP4-201ENST00000378156 FBXL14Q8N1E6 418 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SPICQ8N5J4 248 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 ANKRD20A5PA0PJZ0 165 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 HPXP02790 462 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 PNLIPRP3Q17RR3 467 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 IQCJQ1A5X6 159 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 GDF15Q99988 308 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 TPPP2P59282 170 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 PRAMEF5Q5TYX0 476 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 PRAMEF6Q5VXH4 476 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SPINK14Q6IE38 97 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SLC17A5Q9NRA2 495 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 CST4P01036 141 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SFTA3P0C7M3 94 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 ACAA2P42765 397 aaKnown RBP13.34□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF774Q6NX45 483 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 THNSL2Q86YJ6 484 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 MTCH1Q9NZJ7 389 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 LAMP3Q9UQV4 416 aa13.34□□□□□ -0.27
NPHP4-201ENST00000378156 SPTBP11277 2137 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 ICE1Q9Y2F5 2266 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.27
NPHP4-201ENST00000378156 RGS13O14921 159 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 RAB13P51153 203 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 HES1Q14469 280 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 RFLNBQ8N5W9 214 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 LYRM2Q9NU23 88 aaPredicted RBP13.33□□□□□ -0.27
NPHP4-201ENST00000378156 ICAM5Q9UMF0 924 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 PPP1R3CQ9UQK1 317 aa13.33□□□□□ -0.27
NPHP4-201ENST00000378156 CBY3A6NI87 242 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 KISS1Q15726 138 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 PABPC1L2AQ5JQF8 200 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 HSD17B13Q7Z5P4 300 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-201ENST00000378156 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
NPHP4-201ENST00000378156 ZDHHC22Q8N966 263 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 ZNF230Q9UIE0 474 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-201ENST00000378156 A0A1W2PPQ1 181 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 SSSCA1O60232 199 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 CTRB1P17538 263 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 FUT3P21217 361 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 GNG3P63215 75 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 ARL16Q0P5N6 197 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 DHRS2Q13268 280 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 CTRB2Q6GPI1 263 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 NECAP1Q8NC96 275 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 OR11H7Q8NGC8 314 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 HGDQ93099 445 aa13.33□□□□□ -0.28
NPHP4-201ENST00000378156 AKR1E2Q96JD6 320 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms