RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 C1QL1O75973 258 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 FAHD2BQ6P2I3 314 aaPredicted RBP11.28□□□□□ -0.6
USP11-204ENST00000377107 Q6ZRG5 221 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 UBALD1Q8TB05 177 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 PP6455Q8WZ26 134 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 FAHD2AQ96GK7 314 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 NMES1Q9C002 83 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 SLC26A1Q9H2B4 701 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 MYOZ1Q9NP98 299 aaPredicted RBP11.28□□□□□ -0.6
USP11-204ENST00000377107 MED9Q9NWA0 146 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 FBXL17Q9UF56 701 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 LY6G6EA0A0G2JKS1 128 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 TRIM77I1YAP6 450 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 TOX3O15405 576 aaPredicted RBP11.27□□□□□ -0.6
USP11-204ENST00000377107 ADH6P28332 368 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 NPBWR1P48145 328 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 VAX1Q5SQQ9 334 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 MRPL14Q6P1L8 145 aaKnown RBP11.27□□□□□ -0.6
USP11-204ENST00000377107 SLC23A3Q6PIS1 610 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 LDLRAD3Q86YD5 345 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 OR10D3Q8NH80 312 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 ASB13Q8WXK3 278 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 U3KQA8 63 aa11.27□□□□□ -0.6
USP11-204ENST00000377107 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 CBR3O75828 277 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 COX6A1P12074 109 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 TMEM33P57088 247 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 LSM6P62312 80 aaKnown RBP11.27□□□□□ -0.61
USP11-204ENST00000377107 ETV3LQ6ZN32 361 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 CD300LFQ8TDQ1 290 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 ANXA10Q9UJ72 324 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 LAMTOR5O43504 91 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 NTF4P34130 210 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 FHITP49789 147 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 CLDN15P56746 228 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 HGFACQ04756 655 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 IKZF1Q13422 519 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 HNF4GQ14541 408 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
USP11-204ENST00000377107 ZNF385CQ66K41 422 aaPredicted RBP11.27□□□□□ -0.61
USP11-204ENST00000377107 ALKBH2Q6NS38 261 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 SEMA5BQ9P283 1151 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
USP11-204ENST00000377107 TSPAN15O95858 294 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 GLP1RP43220 463 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 LPAR6P43657 344 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 ZNF92Q03936 586 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 FOXB1Q99853 325 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 BARX1Q9HBU1 254 aaPredicted RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 VAMP5O95183 116 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 HLA-HP01893 362 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 APOC1P02654 83 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 MUC1P15941 1255 aaPredicted RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 SUCLG1P53597 346 aaKnown RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 RAC1P63000 192 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 EXT1Q16394 746 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 C3AR1Q16581 482 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 SLAMF9Q96A28 289 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 PHYHIPLQ96FC7 376 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 RPS10P5Q9NQ39 176 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 KLF7O75840 302 aaPredicted RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 DAOP14920 347 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 CAMLGP49069 296 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 GSK3AP49840 483 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 MALLQ13021 153 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 IGFBP7Q16270 282 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 TMEM217Q8N7C4 229 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 FADS6Q8N9I5 356 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 UQCC1Q9NVA1 299 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 OSGIN2Q9Y236 505 aa11.26□□□□□ -0.61
USP11-204ENST00000377107 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
USP11-204ENST00000377107 JMJD7P0C870 316 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 PRF1P14222 555 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 CBR1P16152 277 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 EPHA1P21709 976 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 PSG4Q00888 419 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 PPA1Q15181 289 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 CNN3Q15417 329 aaKnown RBP11.25□□□□□ -0.61
USP11-204ENST00000377107 ZIC4Q8N9L1 334 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 BSCL2Q96G97 398 aaPredicted RBP11.25□□□□□ -0.61
USP11-204ENST00000377107 AIFM2Q9BRQ8 373 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
USP11-204ENST00000377107 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
USP11-204ENST00000377107 ADCYAP1P18509 176 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms