RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 ZNF563Q8TA94 476 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 ZPLD1Q8TCW7 415 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 TIMD4Q96H15 378 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 ARL5BQ96KC2 179 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 OR5B2Q96R09 309 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 ZNF300Q96RE9 604 aaPredicted RBP4.85□□□□□ -1.63
SSX3-202ENST00000376893 NSRP1Q9H0G5 558 aaKnown RBP4.85□□□□□ -1.63
SSX3-202ENST00000376893 RNF122Q9H9V4 155 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 SPACA1Q9HBV2 294 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 BCL2L10Q9HD36 194 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 CMTM6Q9NX76 183 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 CLN8Q9UBY8 286 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 SEC14L4Q9UDX3 406 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 NUP50Q9UKX7 468 aa4.85□□□□□ -1.63
SSX3-202ENST00000376893 ZGRF1Q86YA3 2104 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 IGKV1D-42A0A075B6H8 117 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 TMED7-TICAM2A0A0A6YYA0 188 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 FAM220BPB1ANY3 271 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 H3BNX3 289 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 NME4O00746 187 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 AIM2O14862 343 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 SS18L1O75177 396 aaPredicted RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 NGFP01138 241 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 GUSBP08236 651 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 IGFBP1P08833 259 aaPredicted RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 COX4I1P13073 169 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 COX6B1P14854 86 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 PPIBP23284 216 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 AGTR1P30556 359 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 TIMP3P35625 211 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 VHLP40337 213 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 EIF1P41567 113 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 KRTAP10-9P60411 292 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 RND3P61587 244 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 IRX1P78414 480 aaPredicted RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 SRSF4Q08170 494 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 SLAQ13239 276 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CYLC2Q14093 348 aaPredicted RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 TMEM187Q14656 261 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 ZNF829Q3KNS6 432 aaPredicted RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 SLC25A35Q3KQZ1 300 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 COQ5Q5HYK3 327 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 METTL21CQ5VZV1 264 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 STUMQ69YW2 141 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 NANOGP8Q6NSW7 305 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 REEP3Q6NUK4 255 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 XKRXQ6PP77 449 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 RBMS3Q6XE24 437 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 GRINAQ7Z429 371 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 TPRA1Q86W33 373 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CALHM3Q86XJ0 350 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 RBM45Q8IUH3 476 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 LINC01561Q8N1V8 128 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 C8orf31Q8N9H6 132 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 OR8J3Q8NGG0 315 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 OR4D11Q8NGI4 311 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 OR10G7Q8NGN6 311 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 OR1B1Q8NGR6 318 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 FNDC8Q8TC99 324 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 LRRC58Q96CX6 371 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 OPALINQ96PE5 141 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CLCC1Q96S66 551 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 ARHGDIGQ99819 225 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 RBM4Q9BWF3 364 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 SFXN3Q9BWM7 321 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 GAL3ST2Q9H3Q3 398 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 TMEM38AQ9H6F2 299 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 NANOGQ9H9S0 305 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CACYBPQ9HB71 228 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 ESM1Q9NQ30 184 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 ACER3Q9NUN7 267 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CALML5Q9NZT1 146 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 MCTS1Q9ULC4 181 aaKnown RBP4.84□□□□□ -1.63
SSX3-202ENST00000376893 DCHS2Q6V1P9 2916 aa4.84□□□□□ -1.63
SSX3-202ENST00000376893 CELSR2Q9HCU4 2923 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 SPTBN1Q01082 2364 aaKnown RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 ICE1Q9Y2F5 2266 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 A0A1B0GWA3 101 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 A0A1W2PR80 420 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 GMNCA6NCL1 334 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 CPSF4LA6NMK7 179 aaKnown RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 GJE1A6NN92 205 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 C15orf61A6NNL5 157 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 EVPLLA8MZ36 301 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 C11orf98E9PRG8 122 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 KPNA4O00629 521 aaPredicted RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 SHOX2O60902 331 aaPredicted RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 CLPXO76031 633 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 RCBTB2O95199 551 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 ALDOBP05062 364 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 PRSS1P07477 247 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 GATA1P15976 413 aaPredicted RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 IGFBP5P24593 272 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 GTF2E2P29084 291 aaKnown RBP4.83□□□□□ -1.64
SSX3-202ENST00000376893 IFNA8P32881 189 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 GSK3BP49841 420 aa4.83□□□□□ -1.64
SSX3-202ENST00000376893 POLR2HP52434 150 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms