RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 C16orf90A8MZG2 172 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 MFNGO00587 321 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR7C2O60412 319 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 HLA-GP17693 338 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ETV1P50549 477 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 TNXAQ16473 311 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 KPRPQ5T749 579 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 SYT6Q5T7P8 510 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 MORN3Q6PF18 240 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CLEC19AQ6UXS0 136 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 PRNTQ86SH4 94 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 RBM45Q8IUH3 476 aaKnown RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 NELFCDQ8IXH7 590 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CYP4Z2PQ8N1L4 340 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 TRIML2Q8N7C3 387 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 APCDD1LQ8NCL9 501 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR4K2Q8NGD2 314 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR4D6Q8NGJ1 314 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR6K2Q8NGY2 324 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 YIPF6Q96EC8 236 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 MSANTD3Q96H12 275 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 SMIM8Q96KF7 97 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 COPS4Q9BT78 406 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ACOT13Q9NPJ3 140 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 C12orf4Q9NQ89 552 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF302Q9NR11 478 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 PRO0628Q9UI54 55 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 KLF13Q9Y2Y9 288 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 LOXHD1Q8IVV2 1947 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 LOC100506127A0A0U1RQW1 187 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 A0A1B0GW15 77 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 MGAT4DA6NG13 374 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 E7EWF7 191 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CLDN34H7C241 214 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 IVLP07476 585 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR4Q2P0C623 313 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 BGNP21810 368 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 GPR4P46093 362 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR12D2P58182 307 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 RPL10AP62906 217 aaKnown RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 STX4Q12846 297 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 VAMP3Q15836 100 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 Q3ZCU0 254 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ACTL10Q5JWF8 245 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF678Q5SXM1 525 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 PRR9Q5T870 116 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 FAHD1Q6P587 224 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 TBPL2Q6SJ96 375 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CASP12Q6UXS9 341 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 RNF10Q8N5U6 811 aaKnown RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 LINC00337Q8N6G1 96 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 OR52N1Q8NH53 320 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 FAM57AQ8TBR7 257 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 LGALS14Q8TCE9 139 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 KLF14Q8TD94 323 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ORAOV1Q8WV07 137 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 C22orf15Q8WYQ4 148 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 SPACA5Q96QH8 159 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CIB1Q99828 191 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF649Q9BS31 505 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 FRMD8P1Q9BZ68 369 aaPredicted RBP1.1□□□□□ -2.23
VPS13A-206ENST00000376646 RAB1BQ9H0U4 201 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 VAPAQ9P0L0 249 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 CLEC2DQ9UHP7 191 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ANXA10Q9UJ72 324 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 ACOT9Q9Y305 439 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 SVILO95425 2214 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 KIAA1671Q9BY89 1806 aa1.1□□□□□ -2.23
VPS13A-206ENST00000376646 FBN1P35555 2871 aaKnown RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF593O00488 134 aaPredicted RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 ZMPSTE24O75844 475 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 IGLV3-19P01714 112 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 RLN2P04090 185 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 LCN1P31025 176 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 MPIP34949 423 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 MPV17P39210 176 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 RANBP1P43487 201 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 IDH2P48735 452 aaKnown RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 ATP5G2Q06055 141 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 C2orf80Q0P641 193 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 GUSBP1Q15486 140 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 TOMM34Q15785 309 aaPredicted RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 RESP18Q5W5W9 173 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 FAM131AQ6UXB0 335 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 FAM19A1Q7Z5A9 133 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 DAZ4Q86SG3 579 aaKnown RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 SGPP2Q8IWX5 399 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 ST13P4Q8IZP2 240 aaPredicted RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 OR1P1Q8NH06 330 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 TNFRSF14Q92956 283 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 TMIGD2Q96BF3 282 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 ZNF396Q96N95 335 aaPredicted RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 OR2M4Q96R27 311 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 VAT1Q99536 393 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 PDCD1LG2Q9BQ51 273 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 SHCBP1LQ9BZQ2 653 aa1.09□□□□□ -2.23
VPS13A-206ENST00000376646 DAZ1Q9NQZ3 744 aaKnown RBP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 RBM22Q9NW64 420 aaKnown RBP eCLIP1.09□□□□□ -2.23
VPS13A-206ENST00000376646 RMND1Q9NWS8 449 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms