RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SFTA3P0C7M3 94 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 DAOP14920 347 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CPT2P23786 658 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 THBS4P35443 961 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 GPX4P36969 197 aaPredicted RBP12.2□□□□□ -0.46
MSH5-202ENST00000375740 ID4P47928 161 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 SRSF4Q08170 494 aaKnown RBP12.2□□□□□ -0.46
MSH5-202ENST00000375740 PPP1R1AQ13522 171 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 KISS1Q15726 138 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 KCTD9Q7L273 389 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 C1QL2Q7Z5L3 287 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 BHLHE23Q8NDY6 225 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 OR5D18Q8NGL1 313 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 EGLN1Q9GZT9 426 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 MMP26Q9NRE1 261 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 ARID1AO14497 2285 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 FBP1P09467 338 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 GFRA1P56159 465 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 TMEM50BP56557 158 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 TMEM164Q5U3C3 297 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 FIP1L1Q6UN15 594 aaKnown RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 ZNF845Q96IR2 970 aaPredicted RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 CST11Q9H112 138 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 TMEM38BQ9NVV0 291 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 PIGLQ9Y2B2 252 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 R4GN57 208 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 A6NLC8 198 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 MT-CO3P00414 261 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 PATE4P0C8F1 98 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 HRH1P35367 487 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 AIMP2Q13155 320 aaKnown RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 NCMAPQ5T1S8 102 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 GPR137CQ8N3F9 429 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 MRGPRFQ96AM1 343 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 SIGLEC12Q96PQ1 595 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 ALKBH3Q96Q83 286 aaPredicted RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 PRRT1Q99946 306 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 GPR87Q9BY21 358 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
MSH5-202ENST00000375740 CSAG2Q9Y5P2 127 aa12.19□□□□□ -0.46
MSH5-202ENST00000375740 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 F8VVB4 439 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 F8VWA3 439 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 NEURL1O76050 574 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 AGAP20933 346 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 SLC30A7Q8NEW0 376 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 BOKQ9UMX3 212 aaPredicted RBP12.18□□□□□ -0.46
MSH5-202ENST00000375740 C13orf42A0A1B0GVH6 325 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 hCG_1809904A0A1W2PP81 198 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 A0A1W2PR64 198 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 A0A1W2PRV1 198 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 RNASEK-C17orf49H0YIS7 233 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 STMND1H3BQB6 276 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 SYNGR3O43761 229 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 PMP2P02689 132 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 CST2P09228 141 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 TPT1P13693 172 aaKnown RBP12.18□□□□□ -0.46
MSH5-202ENST00000375740 B4GALT1P15291 398 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
MSH5-202ENST00000375740 CRYGSP22914 178 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 RAB35Q15286 201 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 Q6ZSR3 168 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 PNLDC1Q8NA58 520 aaKnown RBP12.18□□□□□ -0.46
MSH5-202ENST00000375740 IP6K3Q96PC2 410 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 OR2S2Q9NQN1 319 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
MSH5-202ENST00000375740 METTL1Q9UBP6 276 aaKnown RBP12.18□□□□□ -0.46
MSH5-202ENST00000375740 H0YIZ8 118 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 GSTP1P09211 210 aaKnown RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 FCGR2AP12318 317 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 ZBTB25P24278 435 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 MPZP25189 248 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 CD80P33681 288 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 DHRS11Q6UWP2 260 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 ZSCAN4Q8NAM6 433 aaPredicted RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR2M7Q8NG81 312 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 ABHD3Q8WU67 409 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms