RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DHRS11Q6UWP2 260 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 MR1Q95460 341 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 TOMM40LQ969M1 308 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 HSF4Q9ULV5 492 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 MSTNO14793 375 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 LCATP04180 440 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 FCGR3AP08637 254 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 NFYBP25208 207 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 PRSS12P56730 875 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 SP6Q3SY56 376 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 PARP11Q9NR21 331 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 ZNF581Q9P0T4 197 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 IGKV1-27A0A075B6S5 117 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 CBR3O75828 277 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 ZNF205O95201 554 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 GAPDHP04406 335 aaKnown RBP12.67□□□□□ -0.38
MSH5-201ENST00000375703 ZNF728P0DKX0 622 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 COX6A1P12074 109 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 CRYGSP22914 178 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 RBP2P50120 134 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 PDZK1IP1Q13113 114 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 IL11RAQ14626 422 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 RAB35Q15286 201 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 CNN3Q15417 329 aaKnown RBP12.67□□□□□ -0.38
MSH5-201ENST00000375703 HLA-BQ31612 363 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 ZNF774Q6NX45 483 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 SRXN1Q9BYN0 137 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
MSH5-201ENST00000375703 SYNGR3O43761 229 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 CD5P06127 495 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 CD80P33681 288 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 RFC3P40938 356 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 ID4P47928 161 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 F2RL1P55085 397 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 MYO7BQ6PIF6 2116 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 BRICD5Q6PL45 260 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 RPS19BP1Q86WX3 136 aaKnown RBP12.66□□□□□ -0.38
MSH5-201ENST00000375703 M1APQ8TC57 530 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 BORCS8Q96FH0 119 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 SULT4A1Q9BR01 284 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 PLEKHA2Q9HB19 425 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 DTYMKP23919 212 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 RAB13P51153 203 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 FAM3AP98173 230 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 Q6ZRG5 221 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 NAT6Q93015 286 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 CRLF2Q9HC73 371 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 KLF2Q9Y5W3 355 aaPredicted RBP12.66□□□□□ -0.38
MSH5-201ENST00000375703 HS3ST3B1Q9Y662 390 aa12.66□□□□□ -0.38
MSH5-201ENST00000375703 KLF7O75840 302 aaPredicted RBP12.65□□□□□ -0.38
MSH5-201ENST00000375703 PATE4P0C8F1 98 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 AKR1D1P51857 326 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 FXYD4P59646 89 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 HGFACQ04756 655 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 IFI44Q8TCB0 444 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 RTN4IP1Q8WWV3 396 aaPredicted RBP12.65□□□□□ -0.38
MSH5-201ENST00000375703 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
MSH5-201ENST00000375703 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 SH2D2AQ9NP31 389 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 GJE1A6NN92 205 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 NRASP01111 189 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
MSH5-201ENST00000375703 HEXAP06865 529 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 CST2P09228 141 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 OR5AC1P0C628 307 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 CHATP28329 748 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 NTF4P34130 210 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
MSH5-201ENST00000375703 RAC3P60763 192 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 TMEM187Q14656 261 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 PEA15Q15121 130 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 GPR137CQ8N3F9 429 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 NAXEQ8NCW5 288 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 DYRK2Q92630 601 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 ERGIC1Q969X5 290 aa12.65□□□□□ -0.38
MSH5-201ENST00000375703 FAM221AA4D161 298 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 C9JQL5 133 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 E5RGE8 158 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 MASP2O00187 686 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 GEMIN2O14893 280 aaKnown RBP12.64□□□□□ -0.39
MSH5-201ENST00000375703 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
MSH5-201ENST00000375703 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
MSH5-201ENST00000375703 SHEQ5VZ18 495 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 LHFPL2Q6ZUX7 228 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 LYZL2Q7Z4W2 148 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 UBAC2Q8NBM4 344 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 NTNG2Q96CW9 530 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms