RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 GSTP1P09211 210 aaKnown RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 ZNF735P0CB33 412 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 VSIG10L2P0DP72 767 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 PPP3CBP16298 524 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 OR4S1Q8NGB4 309 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 SPSB1Q96BD6 273 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 RAB3CQ96E17 227 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 SLC25A15Q9Y619 301 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 HOXC12P31275 282 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 RPS27AP62979 156 aaKnown RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 MEF2DQ14814 521 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 PLAC9Q5JTB6 97 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 IDO2Q6ZQW0 420 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 GVQW1Q8N7I0 195 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 ASCC1Q8N9N2 400 aaKnown RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 S100A13Q99584 98 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 SLC25A21Q9BQT8 299 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 C1QTNF5Q9BXJ0 243 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 ZNF436Q9C0F3 470 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-201ENST00000372447 IFT46Q9NQC8 304 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 B3GNT2Q9NY97 397 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 SCP2D1Q9UJQ7 156 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 NPTNQ9Y639 398 aa13.78□□□□□ -0.2
C9orf78-201ENST00000372447 hCG_38984A0A1B0GV85 526 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 XRCC2O43543 280 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 SSX5O60225 188 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 HLA-HP01893 362 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 HIST1H1DP16402 221 aaKnown RBP13.77□□□□□ -0.21
C9orf78-201ENST00000372447 COL8A1P27658 744 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 TMEM50BP56557 158 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 GNG2P59768 71 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
C9orf78-201ENST00000372447 FAM3AP98173 230 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 ZNF92Q03936 586 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 PPA1Q15181 289 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 CNN3Q15417 329 aaKnown RBP13.77□□□□□ -0.21
C9orf78-201ENST00000372447 Q5BKY6 102 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 CLVS2Q5SYC1 327 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 MEX3BQ6ZN04 569 aaKnown RBP13.77□□□□□ -0.21
C9orf78-201ENST00000372447 RTN4RL2Q86UN3 420 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 BPIFB2Q8N4F0 458 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 FAM89BQ8N5H3 189 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 SPICQ8N5J4 248 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 OR51T1Q8NGJ9 327 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 DLL4Q9NR61 685 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 PTTG3PQ9NZH4 202 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 KCNK7Q9Y2U2 307 aa13.77□□□□□ -0.21
C9orf78-201ENST00000372447 DISC1C4P0D8 188 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 MGMTP16455 207 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 PRKACBP22694 351 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 MTCP1P56278 107 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 PNLIPRP3Q17RR3 467 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 RNASE10Q5GAN6 216 aaKnown RBP13.76□□□□□ -0.21
C9orf78-201ENST00000372447 TMEM42Q69YG0 159 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 LAMTOR1Q6IAA8 161 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 CCDC36Q8IYA8 594 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 OR52B4Q8NGK2 314 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 CPNE2Q96FN4 548 aaPredicted RBP13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SPOCK3Q9BQ16 436 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 ALX4Q9H161 411 aaPredicted RBP13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SLA2Q9H6Q3 261 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 OBP2BQ9NPH6 170 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 AMDHD2Q9Y303 409 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 UBE2QL1A1L167 161 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 NRASP01111 189 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 COX5BP10606 129 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SERPINA2P20848 420 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 PRSS12P56730 875 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 OR8B8Q15620 311 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 OR52W1Q6IF63 320 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 COLCA1Q6ZS62 124 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 WFDC8Q8IUA0 241 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 OR10K1Q8NGX5 313 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 ARHGAP5-AS1Q96IT6 56 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SLC6A7Q99884 636 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 ELL3Q9HB65 397 aaPredicted RBP13.76□□□□□ -0.21
C9orf78-201ENST00000372447 SLC2A8Q9NY64 477 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 MGAT4CQ9UBM8 478 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 ITGB1BP2Q9UKP3 347 aa13.76□□□□□ -0.21
C9orf78-201ENST00000372447 LOC100509620A0A075B734 347 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 MFNGO00587 321 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 CD79AP11912 226 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 MPZP25189 248 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 RAB1AP62820 205 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 NLRC3Q7RTR2 1065 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 MDP1Q86V88 176 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 PRRT1Q99946 306 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 TM2D1Q9BX74 207 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 GON7Q9BXV9 100 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 CHST6Q9GZX3 395 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 POFUT1Q9H488 388 aa13.75□□□□□ -0.21
C9orf78-201ENST00000372447 ANAPC10Q9UM13 185 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms