RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 NRIP2Q9BQI9 281 aa13.68□□□□□ -0.22
TMEM53-203ENST00000372242 RNF167Q9H6Y7 350 aa13.68□□□□□ -0.22
TMEM53-203ENST00000372242 SSR3Q9UNL2 185 aa13.68□□□□□ -0.22
TMEM53-203ENST00000372242 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 OOEPA6NGQ2 149 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CALCBP10092 127 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 USF1P22415 310 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 GALP22466 123 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 MDH2P40926 338 aaKnown RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 SPNS3Q6ZMD2 512 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 MKXQ8IYA7 352 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 OR13F1Q8NGS4 319 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CLDND2Q8NHS1 167 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 TNFAIP8L1Q8WVP5 186 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CEP19Q96LK0 163 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 GAL3ST1Q99999 423 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 TMEM246Q9BRR3 403 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 LGALS8O00214 317 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 SMAD7O15105 426 aaKnown RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 TFF1P04155 84 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 BCL3P20749 454 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 FGF9P31371 208 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 IL2RGP31785 369 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 ERVK11-1P61568 191 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 DYNC1I2Q13409 638 aaKnown RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CPNE2Q96FN4 548 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 GFI1Q99684 422 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CENPOQ9BU64 300 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 CNTD2Q9H8S5 307 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 RBFOX1Q9NWB1 397 aaKnown RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 ETAA1Q9NY74 926 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 DNAJB11Q9UBS4 358 aa13.67□□□□□ -0.22
TMEM53-203ENST00000372242 AK6Q9Y3D8 172 aaKnown RBP13.67□□□□□ -0.22
TMEM53-203ENST00000372242 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-203ENST00000372242 TRAV38-1A0A0B4J264 116 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 MEGF11A6BM72 1044 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 NOS1APO75052 506 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-203ENST00000372242 NXPH2O95156 264 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 CDRT1O95170 752 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 CYB5AP00167 134 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 GYPAP02724 150 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 PTGFRP43088 359 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 ALDH3B2P48448 385 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 MICBQ29980 383 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 TEX36Q5VZQ5 186 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 LYPD6Q86Y78 171 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 SMURF1Q9HCE7 757 aa13.66□□□□□ -0.22
TMEM53-203ENST00000372242 CR1P17927 2039 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 TRAPPC2LH3BP13 241 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 SFTPBP07988 381 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 LSM3P62310 102 aaKnown RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 LYPD2Q6UXB3 125 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 ACP7Q6ZNF0 438 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 PNLDC1Q8NA58 520 aaKnown RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 OR4D6Q8NGJ1 314 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 OR10K1Q8NGX5 313 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 DGCR14Q96DF8 476 aaKnown RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 RBM38Q9H0Z9 239 aaKnown RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 ELL3Q9HB65 397 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-203ENST00000372242 HES4Q9HCC6 221 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 PCDHB10Q9UN67 800 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 GSTK1Q9Y2Q3 226 aa13.65□□□□□ -0.22
TMEM53-203ENST00000372242 SMIM30A4D0T7 59 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 CEACAM18A8MTB9 384 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 AIREO43918 545 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 FSTL3O95633 263 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 ACAA1P09110 424 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 MUC1P15941 1255 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 MYL9P24844 172 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 TGFBR1P36897 503 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 LMO4P61968 165 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 TMEM155Q4W5P6 130 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 NLKQ9UBE8 527 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 ING4Q9UNL4 249 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 TRAV1-2A0A0B4J238 106 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 OR2AT4A6NND4 320 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 KDM4BO94953 1096 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 SNU13P55769 128 aaKnown RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 OR10A3P58181 314 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 SMIM21Q3B7S5 101 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 GLT8D1Q68CQ7 371 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 SAXO1Q8IYX7 474 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 SPICQ8N5J4 248 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 ZSCAN4Q8NAM6 433 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 EMG1Q92979 244 aaKnown RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 KCTD7Q96MP8 289 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 NAA50Q9GZZ1 169 aaKnown RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 RASL12Q9NYN1 266 aa13.64□□□□□ -0.23
TMEM53-203ENST00000372242 MRPS28Q9Y2Q9 187 aaKnown RBP13.64□□□□□ -0.23
TMEM53-203ENST00000372242 A0A1B0GW55 424 aa13.63□□□□□ -0.23
TMEM53-203ENST00000372242 IGHV2-5P01817 119 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms