RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FAM3BP58499 235 aaPredicted RBP13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PPP1R1AQ13522 171 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 OR1L1Q8NH94 360 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 RASL12Q9NYN1 266 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 SRPK3Q9UPE1 567 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 IGSF23A1L1A6 192 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 LBX1P52954 281 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 RNF133Q8WVZ7 376 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PIK3IP1Q96FE7 263 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 OR51M1Q9H341 326 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PGA4P0DJD7 388 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PGA5P0DJD9 388 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 ACP1P24666 158 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 DMRTA2Q96SC8 542 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 CSF3RQ99062 836 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 UTP23Q9BRU9 249 aaKnown RBP13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 CEP250Q9BV73 2442 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 R4GMQ9 66 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 H0YGG7 62 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 H3BQ15 152 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 ZDHHC23Q8IYP9 409 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 TMED3Q9Y3Q3 217 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PGA3P0DJD8 388 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 ICAM2P13598 275 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 FUT7Q11130 342 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 TPBGQ13641 420 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 PBOV1Q9GZY1 135 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 EDARADDQ8WWZ3 215 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 RAB40CQ96S21 281 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 FBXL17Q9UF56 701 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 TIMD4Q96H15 378 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 LCORQ96JN0 433 aaPredicted RBP13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 A0A0G2JLL6 359 aaPredicted RBP13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 PRRT2Q7Z6L0 340 aaPredicted RBP13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 CBLN4Q9NTU7 201 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 KCND3Q9UK17 655 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 FREM3P0C091 2139 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 NDUFB6O95139 128 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 TMEM64Q6YI46 380 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 ERASQ7Z444 233 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 OSR2Q8N2R0 312 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF384Q8TF68 577 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 TMEM208Q9BTX3 173 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 OR2W1Q9Y3N9 320 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 M0R135 149 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF799Q96GE5 643 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 ORM2P19652 201 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 NOGQ13253 232 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 SKP2Q13309 424 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 OR2I1PQ8NGU4 316 aa13.78□□□□□ -0.2
GTF3C4-201ENST00000372146 ZAR1LA6NP61 321 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 SERPINE3A8MV23 424 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 HCRTR1O43613 425 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 DNAL4O96015 105 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 HTN1P15515 57 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 NOTCH3Q9UM47 2321 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 INHBBP09529 407 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF121P58317 390 aaPredicted RBP13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 NPEPL1Q8NDH3 523 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 MED13LQ71F56 2210 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 SMPD2O60906 423 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 CTF1Q16619 201 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 APOOQ9BUR5 198 aa13.77□□□□□ -0.2
GTF3C4-201ENST00000372146 SRSF10O75494 262 aaKnown RBP13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 COL8A1P27658 744 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 NTSR1P30989 418 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 PHF3Q92576 2039 aaKnown RBP13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 C7orf77A4D0Y5 90 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 MFSD2BA6NFX1 497 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 FNDC7Q5VTL7 733 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 SEBOXQ9HB31 216 aaPredicted RBP13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 SPRY1O43609 319 aaPredicted RBP13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 OR5AC1P0C628 307 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 VWA2Q5GFL6 755 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 OR4B1Q8NGF8 309 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 CITED1Q99966 193 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 ANAPC13Q9BS18 74 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 FGF2P09038 288 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 SMIM21Q3B7S5 101 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 ACSM5Q6NUN0 579 aa13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 FAHD2BQ6P2I3 314 aaPredicted RBP13.77□□□□□ -0.21
GTF3C4-201ENST00000372146 SHBQ15464 509 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 NPY5RQ15761 445 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 MRPL16Q9NX20 251 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 IL19Q9UHD0 177 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms