RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 AK3Q9UIJ7 227 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 DMXL2Q8TDJ6 3036 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 LOC102725191A0A1B0GVB3 256 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 NXPH3O95157 252 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 IGKV1D-12P01611 117 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 IGHEP01854 428 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 NMBP08949 121 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 SSBP1Q04837 148 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 CLLU1Q5K131 121 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 DRAM2Q6UX65 266 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 RBPMSQ93062 196 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 TRAV39A0A0B4J263 110 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 GSTP1P09211 210 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 MEOX1P50221 254 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 NUFIP2Q7Z417 695 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 CDH26Q8IXH8 852 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 PRR18Q8N4B5 295 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 DEFB124Q8NES8 71 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 CPNE4Q96A23 557 aaPredicted RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 SLAMF9Q96A28 289 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 HS3ST6Q96QI5 342 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 FAM173AQ9BQD7 235 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 ABI3Q9P2A4 366 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 PRSS50Q9UI38 385 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 SLC7A11Q9UPY5 501 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 BET1O15155 118 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 NKX2-8O15522 239 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 APOC3P02656 99 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 MELTFP08582 738 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 CFPP27918 469 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 MECP2P51608 486 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 NHLRC3Q5JS37 347 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 PEAR1Q5VY43 1037 aaPredicted RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 FAM122CQ6P4D5 195 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 HOGA1Q86XE5 327 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 OR5L1Q8NGL2 311 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 MITD1Q8WV92 249 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 TMEM230Q96A57 120 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 OR10C1Q96KK4 312 aa10.2□□□□□ -0.78
PDE6C-201ENST00000371447 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
PDE6C-201ENST00000371447 SPENQ96T58 3664 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 A0A0U1RQV5 110 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 OR5H8P0DN80 308 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 SELEP16581 610 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 RAB1AP62820 205 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 FAM3AP98173 230 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 BTN1A1Q13410 526 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 SLC22A25Q6T423 547 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 OR2W3Q7Z3T1 314 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ZSCAN4Q8NAM6 433 aaPredicted RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ZBTB44Q8NCP5 570 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 CPT1CQ8TCG5 803 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 WNT2BQ93097 391 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ALX4Q9H161 411 aaPredicted RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 LSM5Q9Y4Y9 91 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 LINC00862A6NCI5 91 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 F8VVB4 439 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 F8VWA3 439 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 APOC1P02654 83 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 RRASP10301 218 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 PRF1P14222 555 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 CCL1P22362 96 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 GFRA1P56159 465 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 TMEM128Q5BJH2 165 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 MEX3BQ6ZN04 569 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 MRPL21Q7Z2W9 205 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 PDZD9Q8IXQ8 264 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ZNF611Q8N823 705 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 OR5M9Q8NGP3 310 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ANGPTL6Q8NI99 470 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 SF3B5Q9BWJ5 86 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 ZNF703Q9H7S9 590 aaPredicted RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 OR5AC2Q9NZP5 309 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 LUZP4Q9P127 313 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 EDARQ9UNE0 448 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 C14orf166Q9Y224 244 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 V9GYS6 101 aa10.19□□□□□ -0.78
PDE6C-201ENST00000371447 TPRP12270 2363 aaKnown RBP10.19□□□□□ -0.78
PDE6C-201ENST00000371447 MSGN1A6NI15 193 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 CRYGSP22914 178 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 HOXA4Q00056 320 aaPredicted RBP10.18□□□□□ -0.78
PDE6C-201ENST00000371447 SPIN3Q5JUX0 258 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 PDSS1Q5T2R2 415 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 OR5AP2Q8NGF4 316 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 APH1AQ96BI3 265 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 ASF1BQ9NVP2 202 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 TAS2R3Q9NYW6 316 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 MUC6Q6W4X9 2439 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 hCG_1807616A0A1W2PRN6 198 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 HS3ST1O14792 307 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 AGPAT2O15120 278 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 DIRAS3O95661 229 aa10.18□□□□□ -0.78
PDE6C-201ENST00000371447 PSMB6P28072 239 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms