RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 PRRT1Q99946 306 aa4.21□□□□□ -1.74
SGIP1-204ENST00000371039 TMEM208Q9BTX3 173 aa4.21□□□□□ -1.74
SGIP1-204ENST00000371039 NXF5Q9H1B4 397 aaKnown RBP4.21□□□□□ -1.74
SGIP1-204ENST00000371039 TUBA4BQ9H853 241 aa4.21□□□□□ -1.74
SGIP1-204ENST00000371039 Q9N2J8 555 aa4.21□□□□□ -1.74
SGIP1-204ENST00000371039 P4HTMQ9NXG6 502 aa4.21□□□□□ -1.74
SGIP1-204ENST00000371039 ZNF814B7Z6K7 855 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 IFNL4K9M1U5 179 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 SFT2D2O95562 160 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 IGLV3-1P01715 115 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PPBPP02775 128 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RAB5AP20339 215 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CPT2P23786 658 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 OR3A4PP47883 348 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 NPY4RP50391 375 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CLDN6P56747 220 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 YPEL5P62699 121 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ARL6IP1Q15041 203 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RNFT1Q5M7Z0 435 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 DMRTA1Q5VZB9 504 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 KCTD9Q7L273 389 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 LINC00346Q8IVM7 164 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ABHD5Q8WTS1 349 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 KCNE4Q8WWG9 221 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 LCN9Q8WX39 176 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 SLC25A44Q96H78 314 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 LYZL4Q96KX0 146 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CNTNAP3BQ96NU0 1288 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CMKLR1Q99788 373 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 OR11A1Q9GZK7 315 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 NKX2-4Q9H2Z4 354 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 B3GAT1Q9P2W7 334 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 MCTS1Q9ULC4 181 aaKnown RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 TRIOBPQ9H2D6 2365 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 F5P12259 2224 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ELOA3DA6NLF2 546 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 DHRS7CA6NNS2 312 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 P2RY10O00398 339 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 DDAH2O95865 285 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 IGHG1P01857 330 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CCL2P13500 99 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 MYOGP15173 224 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RAB6AP20340 208 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 C5AR1P21730 350 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PPP1CCP36873 323 aaKnown RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PEA15Q15121 130 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 USF2Q15853 346 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ELOA3BQ3SY89 546 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 SLC16A14Q7RTX9 510 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 C1QL4Q86Z23 238 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 FAM24BQ8N5W8 94 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ELOA3Q8NG57 546 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 OR2V1Q8NHB1 315 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 SAT2Q96F10 170 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 KCNK17Q96T54 332 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CHRDQ9H2X0 955 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 HIPK2Q9H2X6 1198 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ZNF430Q9H8G1 570 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 MKKSQ9NPJ1 570 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 IKZF2Q9UKS7 526 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 SEC16AO15027 2179 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ZNF724A8MTY0 619 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 ZNF727A8MUV8 499 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PLPP3O14495 311 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 BRI3O95415 125 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 HOXB5P09067 269 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 HOXA5P20719 270 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 DDTP30046 118 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CLDN17P56750 224 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 TMEM33P57088 247 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RAB38P57729 211 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 HSF1Q00613 529 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 GTF3C1Q12789 2109 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 TDGQ13569 410 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 HNF4GQ14541 408 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PRSS8Q16651 343 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 TMEM196Q5HYL7 178 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 EMC4Q5J8M3 183 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 VAX1Q5SQQ9 334 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 MTSS1LQ765P7 747 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 OR52N5Q8NH56 324 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 MRGPRX1Q96LB2 322 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 GUCD1Q96NT3 240 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RNF2Q99496 336 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 RAB11FIP5Q9BXF6 653 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 OR10A5Q9H207 317 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 VCX2Q9H322 139 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 PARP11Q9NR21 331 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 DNAJB11Q9UBS4 358 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 FBXL17Q9UF56 701 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 TUBD1Q9UJT1 453 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 COA3Q9Y2R0 106 aaPredicted RBP4.2□□□□□ -1.74
SGIP1-204ENST00000371039 FLVCR1Q9Y5Y0 555 aa4.2□□□□□ -1.74
SGIP1-204ENST00000371039 CXorf65A6NEN9 183 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 CBY3A6NI87 242 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 SERPINE3A8MV23 424 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 SLC35G6P0C7Q6 338 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 CCNOP22674 350 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 TMEM240Q5SV17 173 aa4.19□□□□□ -1.74
SGIP1-204ENST00000371039 C9orf40Q8IXQ3 194 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms