RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MAL2Q969L2 176 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 LPAR4Q99677 370 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 SLC2A9Q9NRM0 540 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 B4GALT7Q9UBV7 327 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 MUTYHQ9UIF7 546 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 HEATR5AQ86XA9 2040 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 LRP5LA4QPB2 252 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 PSMB11A5LHX3 300 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 H0Y980 276 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 H3BMQ9 156 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 XRCC3O43542 346 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ANGPTL1O95841 491 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR12D1P0DN82 309 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 GABRA1P14867 456 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 UGT2B15P54855 530 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 GFERP55789 205 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 CLDN20P56880 219 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 BTN3A2P78410 334 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 LTBQ06643 244 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR2F1Q13607 317 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 HNF4GQ14541 408 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 SSX1Q16384 188 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ST3GAL2Q16842 350 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ESCO2Q56NI9 601 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 CRIP3Q6Q6R5 217 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 C8orf86Q6ZUL3 223 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TTLL10Q6ZVT0 673 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 Q75L30 129 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 PAQR4Q8N4S7 273 aaPredicted RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR10W1Q8NGF6 305 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR1K1Q8NGR3 316 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 FNDC8Q8TC99 324 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TMEM54Q969K7 222 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 KIRREL1Q96J84 757 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ZNF582Q96NG8 517 aaPredicted RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 FKRPQ9H9S5 495 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ST6GALNAC2Q9UJ37 374 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 MRTO4Q9UKD2 239 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 EXOSC1Q9Y3B2 195 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 PRRC2BQ5JSZ5 2229 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 IGKV3D-15A0A087WSY6 115 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 A0A0G2JK05 382 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TRBV5-5A0A0J9YX44 114 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 DISC1C4P0D8 188 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 H3BS24 57 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 RP2O75695 350 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 IFNW1P05000 195 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 LCKP06239 509 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 H1F0P07305 194 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 AKR1C4P17516 323 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 S100PP25815 95 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 SSR2P43308 183 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 RPS11P62280 158 aaKnown RBP eCLIP3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR1C1Q15619 314 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 HAGHQ16775 308 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 NKPD1Q17RQ9 610 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ZNF550Q7Z398 422 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TMEM17Q86X19 198 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR2AK2Q8NG84 335 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR10G2Q8NGC3 310 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR13D1Q8NGV5 346 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR1P1Q8NH06 330 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR10G6Q8NH81 332 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 PSMF1Q92530 271 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ISOC1Q96CN7 298 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 PGLYRP3Q96LB9 341 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 S1PR3Q99500 378 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TSNAXQ99598 290 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 IFT27Q9BW83 186 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 NUDT9Q9BW91 350 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ARRDC1-AS1Q9H2J1 176 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 AAMDCQ9H7C9 122 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 ZNF780BQ9Y6R6 833 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 CHD3Q12873 2000 aaKnown RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 TRBV5-7A0A0A0MS05 114 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 IQCMA0A1B0GVH7 501 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 RPL36A-HNRNPH2H7BZ11 118 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 M0R036 132 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 VCYO14598 125 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CDC42EP2O14613 210 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR7A10O76100 309 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 HPNP05981 417 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ELANEP08246 267 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 HOXD4P09016 255 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 LIMS3P0CW19 117 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 LIMS4P0CW20 117 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 MAKP20794 623 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 GABRR1P24046 479 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 OPRM1P35372 400 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 AVPR1BP47901 424 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 MLLT10P55197 1068 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 GNG2P59768 71 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ZNF91Q05481 1191 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ST3GAL3Q11203 375 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 C10orf128Q5T292 105 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms