RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SULT1A3P0DMM9 295 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 SULT1A4P0DMN0 295 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 DHODHQ02127 395 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF266Q14584 549 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 USF2Q15853 346 aaPredicted RBP4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 SMIM21Q3B7S5 101 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 OR52W1Q6IF63 320 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 RGS7BPQ6MZT1 257 aaPredicted RBP4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 CPEB3Q8NE35 698 aaKnown RBP4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5AP2Q8NGF4 316 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 OR4D6Q8NGJ1 314 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5M9Q8NGP3 310 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 GLYATL2Q8WU03 294 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 CMBLQ96DG6 245 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 C2orf50Q96LR7 162 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 A0A0B4J2A0 478 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 RFPL4AA6NLU0 287 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 RFPL4AL1F8VTS6 287 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 CCSO14618 274 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 LRP3O75074 770 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 GLRA1P23415 457 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 PTGER4P35408 488 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 GAS1P54826 345 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 DHRS2Q13268 280 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 PEA15Q15121 130 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 TUSC1Q2TAM9 212 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 ST7LQ8TDW4 575 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 RTN4IP1Q8WWV3 396 aaPredicted RBP4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 BOD1Q96IK1 185 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 ALX4Q9H161 411 aaPredicted RBP4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC25A32Q9H2D1 315 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 GHITMQ9H3K2 345 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 IFT22Q9H7X7 185 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 PLEKHA2Q9HB19 425 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM206AQ9NX38 181 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 SHPKQ9UHJ6 478 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 FBXO7Q9Y3I1 522 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 FANCMQ8IYD8 2048 aa4.67□□□□□ -1.66
SMNDC1-202ENST00000369603 C2orf16Q68DN1 1984 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 A0A1B0GV50 99 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 CYTIPO60759 359 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 DUS4LO95620 317 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 CBR1P16152 277 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ADRA2CP18825 462 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 MDH2P40926 338 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PIGPP57054 158 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SNRPNP63162 240 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 HBG1P69891 147 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 HBG2P69892 147 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 RAB31Q13636 194 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 KCNMB1Q16558 191 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 TSPO2Q5TGU0 170 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 NHLRC1Q6VVB1 395 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 GCNT2Q8N0V5 402 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 OR11H4Q8NGC9 324 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 OR13C8Q8NGS7 320 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 POC1BQ8TC44 478 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM54Q969K7 222 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SLAMF9Q96A28 289 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PIK3IP1Q96FE7 263 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 WDR89Q96FK6 387 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ADAT1Q9BUB4 502 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 AKIRIN1Q9H9L7 192 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 RAB18Q9NP72 206 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 G6PC2Q9NQR9 355 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 CSAG2Q9Y5P2 127 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 C17orf51A8MQB3 221 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF724A8MTY0 619 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 CFDP00746 253 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 CLPSP04118 112 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SNRNP70P08621 437 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 FABP6P51161 128 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PPP1CBP62140 327 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 FOXC1Q12948 553 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PDZK1IP1Q13113 114 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SNTB1Q13884 538 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 INO80CQ6PI98 192 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 C1orf174Q8IYL3 243 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM58AQ8N1B3 248 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 MUC20Q8N307 709 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 OR13G1Q8NGZ3 307 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PPP1R1CQ8WVI7 109 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC25A38Q96DW6 304 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PFDN5Q99471 154 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 NUDT16L1Q9BRJ7 211 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 TCEAL7Q9BRU2 100 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PECRQ9BY49 303 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 NIT2Q9NQR4 276 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 DECR2Q9NUI1 292 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 AMDHD2Q9Y303 409 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 MRPS18BQ9Y676 258 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 M0R1B8 84 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 JTBO76095 146 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ACTL6BO94805 426 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ONECUT2O95948 504 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 PI3P19957 117 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 DTYMKP23919 212 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 NKX2-1P43699 371 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms