RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CD200R1LQ6Q8B3 271 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 LYPD2Q6UXB3 125 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
TPM3-211ENST00000368531 PHYHIPQ92561 330 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
TPM3-211ENST00000368531 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 TMEM246Q9BRR3 403 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 RNF167Q9H6Y7 350 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 SMURF1Q9HCE7 757 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 GSTK1Q9Y2Q3 226 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 A0A096LNT2 108 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 SMIM30A4D0T7 59 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 CDRT1O95170 752 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 TFAP2AP05549 437 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 MYL9P24844 172 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 PTGFRP43088 359 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 GABRA2P47869 451 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
TPM3-211ENST00000368531 MICBQ29980 383 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 ZNF404Q494X3 552 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 SPNS3Q6ZMD2 512 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 ACP7Q6ZNF0 438 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 FAM90A1Q86YD7 464 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 MUC20Q8N307 709 aaPredicted RBP11.63□□□□□ -0.55
TPM3-211ENST00000368531 OR10K1Q8NGX5 313 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 EMG1Q92979 244 aaKnown RBP11.63□□□□□ -0.55
TPM3-211ENST00000368531 NRIP2Q9BQI9 281 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 CNTD2Q9H8S5 307 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 RBFOX1Q9NWB1 397 aaKnown RBP11.63□□□□□ -0.55
TPM3-211ENST00000368531 NLKQ9UBE8 527 aa11.63□□□□□ -0.55
TPM3-211ENST00000368531 SHISA3A0PJX4 238 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 CEACAM18A8MTB9 384 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 ADAM20O43506 726 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 AIREO43918 545 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 NOS1APO75052 506 aaPredicted RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 HTR3BO95264 441 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 RPS2P15880 293 aaKnown RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 MUC1P15941 1255 aaPredicted RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 GALP22466 123 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 FGF9P31371 208 aaPredicted RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 ALDH3B2P48448 385 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 CEBPDP49716 269 aaPredicted RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 LOXL1Q08397 574 aaPredicted RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 RSU1Q15404 277 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 TMEM155Q4W5P6 130 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 GLT8D1Q68CQ7 371 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 SPICQ8N5J4 248 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 OR4D6Q8NGJ1 314 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 S100A13Q99584 98 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 CCL13Q99616 98 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 CENPOQ9BU64 300 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 RASL12Q9NYN1 266 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 SCOCQ9UIL1 159 aa11.62□□□□□ -0.55
TPM3-211ENST00000368531 MRPS28Q9Y2Q9 187 aaKnown RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 SETXQ7Z333 2677 aaKnown RBP11.62□□□□□ -0.55
TPM3-211ENST00000368531 RFPL4AA6NLU0 287 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 RFPL4AL1F8VTS6 287 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 SFTPBP07988 381 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 ACAA1P09110 424 aaPredicted RBP11.61□□□□□ -0.55
TPM3-211ENST00000368531 PSG2P11465 335 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 CD99P14209 185 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 PRKACAP17612 351 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 SERPINA2P20848 420 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 DUSP1P28562 367 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 TGFBR1P36897 503 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 OR10A3P58181 314 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 LMO4P61968 165 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 MXD1Q05195 221 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 KCNJ8Q15842 424 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 SMIM21Q3B7S5 101 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 TIMM50Q3ZCQ8 353 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 SLC22A6Q4U2R8 563 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 GPR107Q5VW38 600 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 AWAT2Q6E213 333 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 GLIPR1L1Q6UWM5 242 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 DCDC5Q6ZRR9 648 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 GPR141Q7Z602 305 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 SAXO1Q8IYX7 474 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 ZSCAN4Q8NAM6 433 aaPredicted RBP11.61□□□□□ -0.55
TPM3-211ENST00000368531 KCTD7Q96MP8 289 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 GFI1Q99684 422 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 ZNF665Q9H7R5 613 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 PATZ1Q9HBE1 687 aaKnown RBP11.61□□□□□ -0.55
TPM3-211ENST00000368531 PLGRKTQ9HBL7 147 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 LPAR2Q9HBW0 351 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
TPM3-211ENST00000368531 TRAV1-2A0A0B4J238 106 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 A0A1B0GW55 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 PDCD5O14737 125 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 TMPRSS2O15393 492 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms