RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 NR4A2P43354 598 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 SERPINB10P48595 397 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 PSMD7P51665 324 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 VBP1P61758 197 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 BTG1P62324 171 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
EFNA1-201ENST00000368406 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 ZNF181Q2M3W8 571 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 FAM76BQ5HYJ3 339 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 ANKRD13BQ86YJ7 626 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 Q8IYB0 196 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 OR10Z1Q8NGY1 313 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.7
EFNA1-201ENST00000368406 CEP19Q96LK0 163 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 NARFLQ9H6Q4 476 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 DCAF16Q9NXF7 216 aa10.65□□□□□ -0.7
EFNA1-201ENST00000368406 NIPBLQ6KC79 2804 aaeCLIP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 PPIAL4EA0A075B759 164 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 PPIAL4DF5H284 164 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RP2O75695 350 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 GABARAPO95166 117 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 CSTBP04080 98 aaKnown RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 PPIAL4FP0DN26 164 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 ADRA2CP18825 462 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 MPZP25189 248 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 SDC2P34741 201 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RBMXP38159 391 aaKnown RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 PTGFRP43088 359 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RANBP1P43487 201 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 SNU13P55769 128 aaKnown RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 TMEM33P57088 247 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RIN1Q13671 783 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 KCNJ8Q15842 424 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RAB11BQ15907 218 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 SFRP4Q6FHJ7 346 aaPredicted RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 TPRA1Q86W33 373 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 CDH26Q8IXH8 852 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 ZSCAN4Q8NAM6 433 aaPredicted RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 POC1AQ8NBT0 407 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 DEFB108BQ8NET1 73 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 OR6M1Q8NGM8 313 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 RAB2BQ8WUD1 216 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 UQCC2Q9BRT2 126 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 NAA50Q9GZZ1 169 aaKnown RBP10.64□□□□□ -0.71
EFNA1-201ENST00000368406 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 CNTD2Q9H8S5 307 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 PPIAL4AQ9Y536 164 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 V9GY05 133 aa10.64□□□□□ -0.71
EFNA1-201ENST00000368406 ABCA1O95477 2261 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 CR1P17927 2039 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 IGHV3OR15-7A0A075B7D8 119 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 OOEPA6NGQ2 149 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 WNT9BO14905 357 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 HTR3BO95264 441 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 PGA5P0DJD9 388 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 PRKACAP17612 351 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 EGR1P18146 543 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 BCL3P20749 454 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 SERPINA2P20848 420 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
EFNA1-201ENST00000368406 HTR2CP28335 458 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 TGFBR1P36897 503 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 OR10A3P58181 314 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 NCS1P62166 190 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 BLMHQ13867 455 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 P2RY14Q15391 338 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 MICBQ29980 383 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 SLC22A6Q4U2R8 563 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 FAM201AQ5SY85 155 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 HES5Q5TA89 166 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 GLIPR1L1Q6UWM5 242 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 SLC16A12Q6ZSM3 486 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 C11orf53Q8IXP5 236 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 SAXO1Q8IYX7 474 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 MUC20Q8N307 709 aaPredicted RBP10.63□□□□□ -0.71
EFNA1-201ENST00000368406 GCSAMQ8N6F7 178 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 OR10K1Q8NGX5 313 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 SMR3AQ99954 134 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 GAL3ST1Q99999 423 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 BPESC1Q9GZL8 116 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
EFNA1-201ENST00000368406 PCDHB16Q9NRJ7 776 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 PCDHB10Q9UN67 800 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 WIPI2Q9Y4P8 454 aa10.63□□□□□ -0.71
EFNA1-201ENST00000368406 TRAV38-1A0A0B4J264 116 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 SRRM5B3KS81 715 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 LGALS8O00214 317 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 KDM4BO94953 1096 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 HEXAP06865 529 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 MDH2P40926 338 aaKnown RBP10.62□□□□□ -0.71
EFNA1-201ENST00000368406 TMBIM6P55061 237 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 ZP1P60852 638 aa10.62□□□□□ -0.71
EFNA1-201ENST00000368406 HOXA4Q00056 320 aaPredicted RBP10.62□□□□□ -0.71
EFNA1-201ENST00000368406 CLEC9AQ6UXN8 241 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms