RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 DCTN6O00399 190 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 RER1O15258 196 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 GSTZ1O43708 216 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-203ENST00000361654 H3F3AP84243 136 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 HAGHQ16775 308 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 PRICKLE4Q2TBC4 344 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 MRGPRDQ8TDS7 321 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 Q8WTZ3 238 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 HGDQ93099 445 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 TMPRSS5Q9H3S3 457 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 CHODLQ9H9P2 273 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF586Q9NXT0 402 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 CROCCQ5TZA2 2017 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 NUP98P52948 1817 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SSC5DA1L4H1 1573 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 NME2P1O60361 137 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 PCBP3P57721 371 aaKnown RBP9.74□□□□□ -0.85
CLIP1-203ENST00000361654 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 HAX1O00165 279 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PDCD6O75340 191 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 KIR2DL1P43626 348 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 KIR2DL2P43627 348 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 OR3A1P47881 315 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 LYZP61626 148 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 DHRS7BQ6IAN0 325 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PCGF1Q9BSM1 259 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 SPNS1Q9H2V7 528 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 ADGRL4Q9HBW9 690 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 POMT1Q9Y6A1 747 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 DNPH1O43598 174 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PNPP00491 289 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 RPL7P18124 248 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PI3P19957 117 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 VDAC1P21796 283 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 RPS19P39019 145 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 ERVFRD-1P60508 538 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 CCDC190Q86UF4 302 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 UBE2FQ969M7 185 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 A0A1B0GTH9 108 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 A0A1W2PQD3 144 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 H3BMH7 237 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 IFNL4K9M1U5 179 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 CALCRP30988 508 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 GP2P55259 537 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PJVKQ0ZLH3 352 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 ZBTB37Q5TC79 503 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 DUSP18Q8NEJ0 188 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PCNPQ8WW12 178 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 OR2D2Q9H210 308 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 GHITMQ9H3K2 345 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 MYO18AQ92614 2054 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 IGLV3-16A0A075B6K0 115 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 UBE2L5PA0A1B0GUS4 154 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 ATP6V1G2-DDX39BF2Z307 99 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 EPXP11678 715 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 TAGLNQ01995 201 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 AVPI1Q5T686 147 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 HMGCLL1Q8TB92 370 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 RBM14Q96PK6 669 aaKnown RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 DDA1Q9BW61 102 aa9.73□□□□□ -0.85
CLIP1-203ENST00000361654 FGF20Q9NP95 211 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-203ENST00000361654 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SMLR1H3BR10 107 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 KLRB1Q12918 225 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 NTN4Q9HB63 628 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 RCL1Q9Y2P8 373 aaKnown RBP9.72□□□□□ -0.85
CLIP1-203ENST00000361654 TMED3Q9Y3Q3 217 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PRSS44E7EML9 344 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 TOX4O94842 621 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF596Q8TC21 504 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 DNAJB12Q9NXW2 375 aaKnown RBP9.72□□□□□ -0.85
CLIP1-203ENST00000361654 TRAV1-2A0A0B4J238 106 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 OOEPA6NGQ2 149 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SMPD2O60906 423 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 LALBAP00709 142 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SEMG1P04279 462 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 CST2P09228 141 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 CD200P41217 278 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SNRPNP63162 240 aaKnown RBP9.72□□□□□ -0.85
CLIP1-203ENST00000361654 FMODQ06828 376 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 BAMBIQ13145 260 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 P2RY6Q15077 328 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms