RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SFT2D2O95562 160 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 PGAM2P15259 253 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 NAAAQ02083 359 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 ARFRP1Q13795 201 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 C9orf135Q5VTT2 229 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 LHFPL1Q86WI0 220 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 SUMF1Q8NBK3 374 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 RAB18Q9NP72 206 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 C13orf42A0A1B0GVH6 325 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 TOR1AO14656 332 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 FGF16O43320 207 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 NME2P1O60361 137 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 NME2P22392 152 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 PABPC1L2AQ5JQF8 200 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 CCDC36Q8IYA8 594 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 CPEB3Q8NE35 698 aaKnown RBP19.62■□□□□ 0.73
LDB1-201ENST00000361198 MARC2Q969Z3 335 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 TM2D1Q9BX74 207 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 RAB19A4D1S5 217 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 SYNGR4O95473 234 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 FPR2P25090 351 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 ZNF92Q03936 586 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 SLC30A7Q8NEW0 376 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 SPSB1Q96BD6 273 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 SCGB3A2Q96PL1 93 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 LINC00470Q9BZP3 86 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 MCTS1Q9ULC4 181 aaKnown RBP19.62■□□□□ 0.73
LDB1-201ENST00000361198 PCDHB10Q9UN67 800 aa19.62■□□□□ 0.73
LDB1-201ENST00000361198 KLF13Q9Y2Y9 288 aaPredicted RBP19.62■□□□□ 0.73
LDB1-201ENST00000361198 IGKV1-27A0A075B6S5 117 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 FAM230AA0A1W2PPH8 454 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 MPTX1A8MV57 137 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 DNASE2O00115 360 aaPredicted RBP19.61■□□□□ 0.73
LDB1-201ENST00000361198 GALR2O43603 387 aaPredicted RBP19.61■□□□□ 0.73
LDB1-201ENST00000361198 TMEM225BP0DP42 221 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 NPY4RP50391 375 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 FOXG1P55316 489 aaPredicted RBP19.61■□□□□ 0.73
LDB1-201ENST00000361198 ARF1P84077 181 aaKnown RBP19.61■□□□□ 0.73
LDB1-201ENST00000361198 C3AR1Q16581 482 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 NRN1LQ496H8 165 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 CLEC18BQ6UXF7 455 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 LRRC46Q96FV0 321 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 PECRQ9BY49 303 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 PARPBPQ9NWS1 579 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 PRELID1Q9Y255 219 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 LOC400499M0QZD8 3231 aa19.61■□□□□ 0.73
LDB1-201ENST00000361198 ANGPTL7O43827 346 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 LYL1P12980 280 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 SUPT4H1P63272 117 aaKnown RBP19.6■□□□□ 0.73
LDB1-201ENST00000361198 FAM3AP98173 230 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 UNQ6126/PRO20091Q6UXV3 157 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 OR5H2Q8NGV7 314 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 RTBDNQ9BSG5 229 aaPredicted RBP19.6■□□□□ 0.73
LDB1-201ENST00000361198 TMEM100Q9NV29 134 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 DOCK7Q96N67 2140 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 A0A096LPE4 126 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 hCG_38984A0A1B0GV85 526 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 A0A1W2PPZ6 126 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 ARGFXA6NJG6 315 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 H0YIZ8 118 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 NUPL2O15504 423 aaKnown RBP19.6■□□□□ 0.73
LDB1-201ENST00000361198 SPRY1O43609 319 aaPredicted RBP19.6■□□□□ 0.73
LDB1-201ENST00000361198 CPT2P23786 658 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 NSUN5P2Q63ZY6 315 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 OR1S2Q8NGQ3 325 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 DCUN1D4Q92564 292 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 ST6GALNAC5Q9BVH7 336 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 PRRG4Q9BZD6 226 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 ZC4H2Q9NQZ6 224 aa19.6■□□□□ 0.73
LDB1-201ENST00000361198 KLRC4-KLRK1H3BQV0 150 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 KCNAB3O43448 404 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 TPT1P13693 172 aaKnown RBP19.59■□□□□ 0.73
LDB1-201ENST00000361198 EDN3P14138 238 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 AADACL3Q5VUY0 350 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 TMEM42Q69YG0 159 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 PIP4P1Q86T03 277 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 RRNAD1Q96FB5 475 aaKnown RBP19.59■□□□□ 0.73
LDB1-201ENST00000361198 AIFM2Q9BRQ8 373 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 CYTL1Q9NRR1 136 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 ZNF391Q9UJN7 358 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 OSGIN2Q9Y236 505 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 PLATP00750 562 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 CNN3Q15417 329 aaKnown RBP19.59■□□□□ 0.73
LDB1-201ENST00000361198 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.59■□□□□ 0.73
LDB1-201ENST00000361198 ZSCAN4Q8NAM6 433 aaPredicted RBP19.59■□□□□ 0.73
LDB1-201ENST00000361198 RGCCQ9H4X1 137 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 PARD6AQ9NPB6 346 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 LIPGQ9Y5X9 500 aa19.59■□□□□ 0.73
LDB1-201ENST00000361198 ZNF587BE7ETH6 402 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 NRASP01111 189 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 GABRR1P24046 479 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 C6orf201Q7Z4U5 140 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 BAP18Q8IXM2 172 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 OR13G1Q8NGZ3 307 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 MAFIPQ8WZ33 124 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 Q96M66 194 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 BCO1Q9HAY6 547 aa19.58■□□□□ 0.73
LDB1-201ENST00000361198 RPL36A-HNRNPH2H7BZ11 118 aa19.58■□□□□ 0.72
LDB1-201ENST00000361198 AMY2BP19961 511 aa19.58■□□□□ 0.72
LDB1-201ENST00000361198 RBP2P50120 134 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms