RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 WNT5AP41221 380 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PSG7Q13046 419 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PRSS57Q6UWY2 283 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 RTN4RL2Q86UN3 420 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 S1PR3Q99500 378 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 OCEL1Q9H607 264 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 TXNL4BQ9NX01 149 aaKnown RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 HTTP42858 3142 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 SDCBPO00560 298 aaPredicted RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 ALX3O95076 343 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 CD55P08174 381 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 EPHA2P29317 976 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PDZK1IP1Q13113 114 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 RDH10Q8IZV5 341 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 ZFAND1Q8TCF1 268 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 NMD3Q96D46 503 aaKnown RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 METRNQ9UJH8 293 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 NR4A2P43354 598 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PLAURQ03405 335 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 RTL8BQ17RB0 113 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 SFXN4Q6P4A7 337 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 ACBD4Q8NC06 268 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PXT1Q8NFP0 134 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 ZNF714Q96N38 554 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 DPCDQ9BVM2 203 aaPredicted RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 SUCNR1Q9BXA5 334 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 GSX2Q9BZM3 304 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 KIF26BQ2KJY2 2108 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 TRAV18A0A075B6X5 111 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 MGST3O14880 152 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 MGMTP16455 207 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
UPF2-202ENST00000357604 CRYBB2P43320 205 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 C11orf91Q3C1V1 193 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ANKRD13BQ86YJ7 626 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 GALMQ96C23 342 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 OR5M11Q96RB7 305 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 TREM2Q9NZC2 230 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 EXTL2Q9UBQ6 330 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 IGHV3-64DA0A0J9YX35 117 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 DPPA5A6NC42 116 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 A6NIN4 97 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ANGPTL7O43827 346 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ACTL6BO94805 426 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 COL10A1Q03692 680 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 TOMM5Q8N4H5 51 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ZNF596Q8TC21 504 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 SLC5A7Q9GZV3 580 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 CHST6Q9GZX3 395 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 PRELID3BQ9Y3B1 194 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 HSPB6O14558 160 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 MPPED1O15442 326 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 NGFP01138 241 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 MAGEB1P43366 347 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 KIR2DS2P43631 304 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 HES1Q14469 280 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 CDNFQ49AH0 187 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 LIN54Q6MZP7 749 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 PRSS35Q8N3Z0 413 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 POC1AQ8NBT0 407 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 IGHV3OR15-7A0A075B7D8 119 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 SERPINE3A8MV23 424 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 MAGEB4O15481 346 aaPredicted RBP7.84□□□□□ -1.15
UPF2-202ENST00000357604 GZMHP20718 246 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 GRNP28799 593 aaKnown RBP7.84□□□□□ -1.15
UPF2-202ENST00000357604 KIR3DL2P43630 455 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 THOC7Q6I9Y2 204 aaKnown RBP7.84□□□□□ -1.15
UPF2-202ENST00000357604 IL1F10Q8WWZ1 152 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 ZC4H2Q9NQZ6 224 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 FKBP14Q9NWM8 211 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 SLC23A1Q9UHI7 598 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 KCNIP3Q9Y2W7 256 aa7.84□□□□□ -1.15
UPF2-202ENST00000357604 PPIAL4CA0A0B4J2A2 164 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 OR2AT4A6NND4 320 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 SLC17A2O00624 439 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 GSTP1P09211 210 aaKnown RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 LIMS3P0CW19 117 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 LIMS4P0CW20 117 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 PPIAL4GP0DN37 164 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 FXYD6P3P58550 94 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 ERVS71-1P61550 626 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 SEC61A1P61619 476 aaKnown RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 SPSB4Q96A44 273 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 RPEQ96AT9 228 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 KIRREL1Q96J84 757 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 DERL3Q96Q80 235 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 ST6GALNAC5Q9BVH7 336 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 FUNDC2Q9BWH2 189 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 F2RL2O00254 374 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 CLDN1O95832 211 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 TGFAP01135 160 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 CCL1P22362 96 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 LRRC28Q86X40 367 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 OR2AK2Q8NG84 335 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 Q8TCH9 128 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 SCPEP1Q9HB40 452 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms