RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 TRAPPC2LH3BP13 241 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 SSX4O60224 188 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 BCL3P20749 454 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 PTH2RP49190 550 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 RORCP51449 518 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 RSU1Q15404 277 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 CARTPTQ16568 116 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 FAM166AQ6J272 317 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 LINC00299Q6ZSB3 139 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 SAXO1Q8IYX7 474 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 PXT1Q8NFP0 134 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 OR10K1Q8NGX5 313 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 SLC25A28Q96A46 364 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 CEP19Q96LK0 163 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 DCUN1D5Q9BTE7 237 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 METTL9Q9H1A3 318 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
UBXN11-202ENST00000357089 F8VVB4 439 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 F8VWA3 439 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 WNT9BO14905 357 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ZNF205O95201 554 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SFTPBP07988 381 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 CALCBP10092 127 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ARSBP15848 533 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 CFHR2P36980 270 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 MRPS11P82912 194 aaKnown RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ZNF181Q2M3W8 571 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 FAM201AQ5SY85 155 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 POC1AQ8NBT0 407 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 OR51D1Q8NGF3 324 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 OR10Z1Q8NGY1 313 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 TBC1D15Q8TC07 691 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 GSX2Q9BZM3 304 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 C2CD3Q4AC94 2353 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 A0A1W2PP11 408 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 TMEM178BH3BS89 294 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 RP2O75695 350 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 KDM4BO94953 1096 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 NXPH2O95156 264 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 LHBP01229 141 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 CSTBP04080 98 aaKnown RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 PAX1P15863 534 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 EGR1P18146 543 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SERPINA2P20848 420 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 GLRA1P23415 457 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 CFPP27918 469 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SOX6P35712 828 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 DEFB113Q30KQ7 82 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ASCL4Q6XD76 172 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 ZNF525Q8N782 197 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 SEH1LQ96EE3 360 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 NRIP2Q9BQI9 281 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 WDR13Q9H1Z4 485 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 RBFOX1Q9NWB1 397 aaKnown RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
UBXN11-202ENST00000357089 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 NPTNQ9Y639 398 aa12.35□□□□□ -0.43
UBXN11-202ENST00000357089 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 A0A1B0GVG6 124 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 NOS1APO75052 506 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 HTR3BO95264 441 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 BPNT1O95861 308 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 PAHP00439 452 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 ACAA1P09110 424 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 UBBP0CG47 229 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 VSIG8P0DPA2 414 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 SNRPBP14678 240 aaKnown RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 CD80P33681 288 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 DGUOKQ16854 277 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 SFRP4Q6FHJ7 346 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 OR10K2Q6IF99 312 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 Q8IYB0 196 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 NINJ1Q92982 152 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-202ENST00000357089 CHODLQ9H9P2 273 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 AKAP6Q13023 2319 aa12.34□□□□□ -0.43
UBXN11-202ENST00000357089 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
UBXN11-202ENST00000357089 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-202ENST00000357089 INHBBP09529 407 aa12.33□□□□□ -0.44
UBXN11-202ENST00000357089 PRKACAP17612 351 aa12.33□□□□□ -0.44
UBXN11-202ENST00000357089 SNU13P55769 128 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms