RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 FAM201AQ5SY85 155 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 CRIP3Q6Q6R5 217 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 LRRTM1Q86UE6 522 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 TNFAIP8L1Q8WVP5 186 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 SLAMF9Q96A28 289 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 SMURF1Q9HCE7 757 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 PCDHB10Q9UN67 800 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 IGHV4-61A0A0C4DH41 118 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 LOC100506127A0A0U1RQW1 187 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 EGR1P18146 543 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 CD80P33681 288 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 RPL5P46777 297 aaKnown RBP13.02□□□□□ -0.32
TRIM13-201ENST00000356017 ALDH3B2P48448 385 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 FIP1L1Q6UN15 594 aaKnown RBP13.02□□□□□ -0.32
TRIM13-201ENST00000356017 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 KCTD7Q96MP8 289 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 PCDHB16Q9NRJ7 776 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 NLKQ9UBE8 527 aa13.02□□□□□ -0.32
TRIM13-201ENST00000356017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
TRIM13-201ENST00000356017 WNT9BO14905 357 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 ANGPTL7O43827 346 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 AIREO43918 545 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 ZNF780AO75290 641 aaPredicted RBP13.02□□□□□ -0.33
TRIM13-201ENST00000356017 KDM4BO94953 1096 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 ADRA2CP18825 462 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 BMXP51813 675 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 GMFBP60983 142 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 ACP7Q6ZNF0 438 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 RNF144BQ7Z419 303 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 GPR141Q7Z602 305 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 LYPD6Q86Y78 171 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 C19orf18Q8NEA5 215 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 RAB39BQ96DA2 213 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 ZNF488Q96MN9 340 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 TMEM246Q9BRR3 403 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 FUNDC2Q9BWH2 189 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 DNTTIP1Q9H147 329 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 NARFLQ9H6Q4 476 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 CNTD2Q9H8S5 307 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
TRIM13-201ENST00000356017 A0A096LNT2 108 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 OR2AT4A6NND4 320 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 CD37P11049 281 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 OR3A4PP47883 348 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 MTNR1BP49286 362 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 BLMHQ13867 455 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 GPR176Q14439 515 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 RSU1Q15404 277 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 METTL9Q9H1A3 318 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 ELL3Q9HB65 397 aaPredicted RBP13.01□□□□□ -0.33
TRIM13-201ENST00000356017 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
TRIM13-201ENST00000356017 IGKV1-12A0A0C4DH73 117 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 H7C1Q1 480 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 KNG1P01042 644 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 IGKV1D-12P01611 117 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 CSTBP04080 98 aaKnown RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 BCL3P20749 454 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 HOXA4Q00056 320 aaPredicted RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 C1orf100Q5SVJ3 147 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 ATPAF1Q5TC12 328 aaPredicted RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 ELP2Q6IA86 826 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 FAM58AQ8N1B3 248 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 OR6M1Q8NGM8 313 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 EMG1Q92979 244 aaKnown RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 ZNF665Q9H7R5 613 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 IL36GQ9NZH8 169 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 ING4Q9UNL4 249 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 MRPS28Q9Y2Q9 187 aaKnown RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 AK6Q9Y3D8 172 aaKnown RBP13□□□□□ -0.33
TRIM13-201ENST00000356017 V9GY05 133 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 AKAP9Q99996 3911 aa13□□□□□ -0.33
TRIM13-201ENST00000356017 IGHV3OR15-7A0A075B7D8 119 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 CEACAM18A8MTB9 384 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 IGHV2-5P01817 119 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 GYPAP02724 150 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 UBBP0CG47 229 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 RPS2P15880 293 aaKnown RBP12.99□□□□□ -0.33
TRIM13-201ENST00000356017 RAB3BP20337 219 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 HTR2CP28335 458 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 NPBWR2P48146 333 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 LMO4P61968 165 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 SPIN3Q5JUX0 258 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 STUMQ69YW2 141 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 AWAT2Q6E213 333 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 SLC36A1Q7Z2H8 476 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 C1QL2Q7Z5L3 287 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 SEH1LQ96EE3 360 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
TRIM13-201ENST00000356017 HMG20AQ9NP66 347 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms