RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SLC39A9Q9NUM3 307 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 VSIG4Q9Y279 399 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 MFSD2BA6NFX1 497 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 HS3ST1O14792 307 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 DHHO43323 396 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 CLDN1O95832 211 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 BGLAPP02818 100 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ADRA2CP18825 462 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 THBS4P35443 961 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 RAB4BP61018 213 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 FUT7Q11130 342 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 KISS1Q15726 138 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 LTC4SQ16873 150 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.91□□□□□ -0.66
COLCA1-201ENST00000355430 FAM219AQ8IW50 185 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF561Q8N587 486 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 RAB1BQ9H0U4 201 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 PLK3Q9H4B4 646 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 OPA3Q9H6K4 179 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 KLK13Q9UKR3 277 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 KLF4O43474 513 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 TPPPO94811 219 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 CST4P01036 141 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 HBG1P69891 147 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 HBG2P69892 147 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 CATR1Q13166 79 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 TESK1Q15569 626 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 LRFN3Q9BTN0 628 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 IFT22Q9H7X7 185 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 RPS4Y1P22090 263 aaKnown RBP10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ELLP55199 621 aaPredicted RBP10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SNRPEP62304 92 aaKnown RBP10.91□□□□□ -0.66
COLCA1-201ENST00000355430 RAC1P63000 192 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ADIRFQ15847 76 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 DEGS2Q6QHC5 323 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 TFAP2EQ6VUC0 442 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SSX8Q7RTT4 187 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM74BQ9NUR3 256 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 CRHP06850 196 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 KLRB1Q12918 225 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 OVCH2Q7RTZ1 564 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 TBX6O95947 436 aaPredicted RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 NQO2P16083 231 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 BAXQ07812 192 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 RPL7L1Q6DKI1 246 aaKnown RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 NPAS1Q99742 590 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 RAB33BQ9H082 229 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 MED19A0JLT2 244 aaPredicted RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF732B4DXR9 585 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 SOCS1O15524 211 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 ZIC2O95409 532 aaPredicted RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 S100A8P05109 93 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 SLC37A1P57057 533 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 ZP1P60852 638 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 MSMO1Q15800 293 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 GUK1Q16774 197 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 C20orf196Q8IYI0 205 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 PTPMT1Q8WUK0 201 aaPredicted RBP10.9□□□□□ -0.66
COLCA1-201ENST00000355430 AICDAQ9GZX7 198 aa10.9□□□□□ -0.66
COLCA1-201ENST00000355430 KNTC1P50748 2209 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 DFFBO76075 338 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 FGF5P12034 268 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 GALNSP34059 522 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF83P51522 516 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 RAB31Q13636 194 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 CLEC18BQ6UXF7 455 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 NR2C2APQ86WQ0 139 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 RPS4Y2Q8TD47 263 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 RXFP4Q8TDU9 374 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.67
COLCA1-201ENST00000355430 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 RAB27BO00194 218 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 PTGFRP43088 359 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF239Q16600 458 aaKnown RBP10.89□□□□□ -0.67
COLCA1-201ENST00000355430 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
COLCA1-201ENST00000355430 STPG2Q8N412 459 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 AMELYQ99218 206 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 SARGQ9BW04 601 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 PILRAQ9UKJ1 303 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 TNFSF18Q9UNG2 199 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 ST3GAL6Q9Y274 331 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 TSC2P49815 1807 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 A0A0G2JK05 382 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 TRBV5-5A0A0J9YX44 114 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 ACP1P24666 158 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 EDDM3AQ14507 147 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 PDCD1Q15116 288 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 SKA3Q8IX90 412 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 RASL10BQ96S79 203 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms