RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CAPZBP47756 277 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 TMEM182Q6ZP80 229 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-202ENST00000351691 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 OR5L2Q8NGL0 311 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 PBOV1Q9GZY1 135 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-202ENST00000351691 DKKL1Q9UK85 242 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 MMACHCQ9Y4U1 282 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 NSG1A0A0A6YYJ2 146 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 SDCBPO00560 298 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-202ENST00000351691 SCAF4O95104 1147 aaKnown RBP13.12□□□□□ -0.31
TRAF3-202ENST00000351691 UTS2O95399 124 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 HCKP08631 526 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 GZMBP10144 247 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 ZNF20P17024 532 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 H3F3AP84243 136 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 TNFRSF9Q07011 255 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 CHRFAM7AQ494W8 412 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 PDZD11Q5EBL8 140 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 KLHL24Q6TFL4 600 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 OR5AS1Q8N127 324 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-202ENST00000351691 SLC46A1Q96NT5 459 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 OR10A2Q9H208 303 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 MOB1AQ9H8S9 216 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 CYP8B1Q9UNU6 501 aa13.12□□□□□ -0.31
TRAF3-202ENST00000351691 SERPINE3A8MV23 424 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 PLPP3O14495 311 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 MPZL1O95297 269 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 OR5AC1P0C628 307 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 CASP6P55212 293 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 ZNF266Q14584 549 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 ICAM4Q14773 271 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 ZNF664Q8N3J9 261 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 OR14K1Q8NGZ2 314 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 R3HDM4Q96D70 268 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 RBMXL1Q96E39 390 aaKnown RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 TRBV24-1A0A075B6N3 115 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 A0A087WZY1 265 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 H0YL77 283 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 NPIPB7O75200 414 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 SCGB1D2O95969 90 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 BCKDHBP21953 392 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 ACY1Q03154 408 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 TMEM176BQ3YBM2 270 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 COA6Q5JTJ3 125 aaKnown RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 LCN10Q6JVE6 187 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-202ENST00000351691 SUCNR1Q9BXA5 334 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 CDH20Q9HBT6 801 aa13.11□□□□□ -0.31
TRAF3-202ENST00000351691 C17orf105B2RV13 164 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 CCL20P78556 96 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 HAGHQ16775 308 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 ABLIM2Q6H8Q1 611 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 SHDQ96IW2 340 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 CRLF2Q9HC73 371 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 WSB1Q9Y6I7 421 aa13.1□□□□□ -0.31
TRAF3-202ENST00000351691 FAM230AA0A1W2PPH8 454 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 DUSP1P28562 367 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 ALDH3B1P43353 468 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 DCAF7P61962 342 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 TMEM187Q14656 261 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 SEMA6DQ8NFY4 1073 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 SSC4DQ8WTU2 575 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 COLQQ9Y215 455 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-202ENST00000351691 URGCP-MRPS24S4R325 110 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 CLDN34H7C241 214 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 HBE1P02100 147 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 OR3A4PP47883 348 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 SLC37A1P57057 533 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 OR2G3Q8NGZ4 309 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 SLC25A36Q96CQ1 311 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 C18orf12Q96KH6 178 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 GPR87Q9BY21 358 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 PECRQ9BY49 303 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 BANF2Q9H503 90 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 GPR84Q9NQS5 396 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 CENPMQ9NSP4 180 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 PADI1Q9ULC6 663 aa13.09□□□□□ -0.31
TRAF3-202ENST00000351691 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 PITX3O75364 302 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 DFFBO76075 338 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms