RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MEX3AA1L020 520 aaKnown RBP12.11□□□□□ -0.47
TRIM4-201ENST00000349062 ZNF850A8MQ14 1090 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 ZNF587BE7ETH6 402 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 SSX5O60225 188 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 CBX5P45973 191 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
TRIM4-201ENST00000349062 HIKESHIQ53FT3 197 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 H3F3CQ6NXT2 135 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 SLC36A1Q7Z2H8 476 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-201ENST00000349062 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
TRIM4-201ENST00000349062 NFYBP25208 207 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 RD3LP0DJH9 198 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 SLC16A13Q7RTY0 426 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 FOXD3Q9UJU5 478 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 MCTS1Q9ULC4 181 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 FAM96BQ9Y3D0 163 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 HIST1H1DP16402 221 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 FKBP2P26885 142 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 IKZF1Q13422 519 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 SNTB1Q13884 538 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 FAM27BQ5VT28 67 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 CCDC36Q8IYA8 594 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 CPEB3Q8NE35 698 aaKnown RBP12.1□□□□□ -0.47
TRIM4-201ENST00000349062 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 MOB1AQ9H8S9 216 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
TRIM4-201ENST00000349062 ARPC4-TTLL3A0A0A6YYG9 625 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 RFPL4AA6NLU0 287 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 RFPL4AL1F8VTS6 287 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 NGFP01138 241 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 HOXB5P09067 269 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 MPGP29372 298 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 LDLRAD3Q86YD5 345 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 TMEM229BQ8NBD8 167 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 ZNF703Q9H7S9 590 aaPredicted RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 PURGQ9UJV8 347 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 IGF2RP11717 2491 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 TNRC6BQ9UPQ9 1833 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 SULT1C2O00338 296 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 LDLRAD4O15165 306 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 NRASP01111 189 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 GLRA1P23415 457 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 RIPPLY1Q0D2K3 151 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 ECH1Q13011 328 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 AQP3Q92482 292 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 UQCC2Q9BRT2 126 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 CHMP1AQ9HD42 196 aaPredicted RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 NDUFA2O43678 99 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 ADAP1O75689 374 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 UBBP0CG47 229 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 ESRP2Q9H6T0 727 aaKnown RBP12.09□□□□□ -0.47
TRIM4-201ENST00000349062 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
TRIM4-201ENST00000349062 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 ABCD4O14678 606 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SFTPBP07988 381 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SPP1P10451 314 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SLC10A1Q14973 349 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 RNFT1Q5M7Z0 435 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SLC25A26Q70HW3 274 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SVBPQ8N300 66 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 APH1AQ96BI3 265 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 DDA1Q9BW61 102 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 PARP12Q9H0J9 701 aaKnown RBP12.08□□□□□ -0.48
TRIM4-201ENST00000349062 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
TRIM4-201ENST00000349062 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms