RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 LYRM4Q9HD34 91 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 GSKIPQ9P0R6 139 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 NAGKQ9UJ70 344 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 RNF115Q9Y4L5 304 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 TRBV5-5A0A0J9YX44 114 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 HRKO00198 91 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 GPR75O95800 540 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 PNPP00491 289 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 CEACAM1P13688 526 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
RTN3-203ENST00000341307 FCGR2CP31995 323 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 TMEM33P57088 247 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 S100A10P60903 97 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 CCL20P78556 96 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 PSG6Q00889 435 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 PRICKLE4Q2TBC4 344 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.44□□□□□ -0.74
RTN3-203ENST00000341307 FHL5Q5TD97 284 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 OPN5Q6U736 354 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 ZNF679Q8IYX0 411 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 TNFRSF14Q92956 283 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 TMEM18Q96B42 140 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 FAM3DQ96BQ1 224 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 C20orf144Q9BQM9 153 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 VPS25Q9BRG1 176 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 OR11A1Q9GZK7 315 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 SLC26A1Q9H2B4 701 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 WDR45Q9Y484 360 aa10.44□□□□□ -0.74
RTN3-203ENST00000341307 RIF1Q5UIP0 2472 aaKnown RBP10.44□□□□□ -0.74
RTN3-203ENST00000341307 PCDH15Q96QU1 1955 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 TGFBR3LH3BV60 316 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 ZNF16P17020 682 aaPredicted RBP10.43□□□□□ -0.74
RTN3-203ENST00000341307 CXCR1P25024 350 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 APOBEC1P41238 236 aaKnown RBP10.43□□□□□ -0.74
RTN3-203ENST00000341307 CAPZBP47756 277 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 MMP16P51512 607 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 FGF8P55075 233 aaPredicted RBP10.43□□□□□ -0.74
RTN3-203ENST00000341307 ARHGEF39Q8N4T4 335 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 RNF128Q8TEB7 428 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 COMMD4Q9H0A8 199 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 GPR35Q9HC97 309 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 RAB18Q9NP72 206 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 ZNF107Q9UII5 783 aaPredicted RBP10.43□□□□□ -0.74
RTN3-203ENST00000341307 SLC13A4Q9UKG4 626 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 C19orf53Q9UNZ5 99 aaPredicted RBP10.43□□□□□ -0.74
RTN3-203ENST00000341307 SPACA6W5XKT8 324 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 KMT2EQ8IZD2 1858 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 THADAQ6YHU6 1953 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 WDFY3Q8IZQ1 3526 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 SPAG17Q6Q759 2223 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 TRAV27A0A087WT01 109 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 IGHV5-51A0A0C4DH38 117 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 H3BSH0 61 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 FBXO45P0C2W1 286 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 SP9P0CG40 484 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 ZNF708P17019 499 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 OR10J1P30954 320 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 CCKARP32238 428 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 FASLGP48023 281 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 MGAT2Q10469 447 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 OR10AC1Q8NH08 325 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 WFDC12Q8WWY7 111 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 ERGIC1Q969X5 290 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 SDF2Q99470 211 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 SLCO5A1Q9H2Y9 848 aa10.43□□□□□ -0.74
RTN3-203ENST00000341307 LOC100289279A0A1B0GTE1 492 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 FOXS1O43638 330 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 CFPP27918 469 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 DUSP8Q13202 625 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 GGTLC2Q14390 218 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 SLC22A6Q4U2R8 563 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 ZAR1Q86SH2 424 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 C9orf40Q8IXQ3 194 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 CYB561D1Q8N8Q1 229 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 STT3BQ8TCJ2 826 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 PGAM5Q96HS1 289 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 SF3B5Q9BWJ5 86 aaKnown RBP10.42□□□□□ -0.74
RTN3-203ENST00000341307 NMNAT2Q9BZQ4 307 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 SOHLH2Q9NX45 425 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 EML5Q05BV3 1969 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 TRBV5-7A0A0A0MS05 114 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 CCDC163A0A0D9SF12 145 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.42□□□□□ -0.74
RTN3-203ENST00000341307 PPP5D1E7EU14 171 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
RTN3-203ENST00000341307 PRKNO60260 465 aaPredicted RBP10.42□□□□□ -0.74
RTN3-203ENST00000341307 RPP14O95059 124 aaKnown RBP10.42□□□□□ -0.74
RTN3-203ENST00000341307 RCBTB2O95199 551 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 PRH1P02810 166 aa10.42□□□□□ -0.74
RTN3-203ENST00000341307 PET100P0DJ07 73 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms