RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 PAPOLGQ9BWT3 736 aaKnown RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 TTTY12Q9BZ98 90 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 DEFB127Q9H1M4 99 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 A0A0D9SG52 128 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 OR6C6A6NF89 314 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 MFSD2BA6NFX1 497 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 MSGN1A6NI15 193 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 FIGNL2A6NMB9 653 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 FPR2P25090 351 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 TAS2R31P59538 309 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 H3F3CQ6NXT2 135 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ACOT7LQ6ZUV0 252 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 TMPRSS7Q7RTY8 843 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 CALHM1Q8IU99 346 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 KCNRGQ8N5I3 272 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF703Q9H7S9 590 aaPredicted RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 OR5AC2Q9NZP5 309 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ST3GAL6Q9Y274 331 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF503-AS2A6NEH8 195 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 OR7C1O76099 320 aaPredicted RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 NAT1P18440 290 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 NUP62P37198 522 aaPredicted RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 NPBWR2P48146 333 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 TAS2R46P59540 309 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 HES3Q5TGS1 186 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 SLC25A26Q70HW3 274 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 OVCH2Q7RTZ1 564 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ZBTB44Q8NCP5 570 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 FAM173AQ9BQD7 235 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 NUDT16L1Q9BRJ7 211 aaKnown RBP8.97□□□□□ -0.97
LIMA1-201ENST00000341247 LIME1Q9H400 295 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 ZC4H2Q9NQZ6 224 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 OSGIN2Q9Y236 505 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 SPEF1Q9Y4P9 236 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 PRR14LQ5THK1 2151 aa8.97□□□□□ -0.97
LIMA1-201ENST00000341247 IGHV3-64DA0A0J9YX35 117 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SERPINE3A8MV23 424 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SHOXO15266 292 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 BCL2L11O43521 198 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 CYTIPO60759 359 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SCGB1D2O95969 90 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 MPZP25189 248 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 DUSP1P28562 367 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 RAB32Q13637 225 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 CNN3Q15417 329 aaKnown RBP8.96□□□□□ -0.97
LIMA1-201ENST00000341247 PHLDA2Q53GA4 152 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 ACTBL2Q562R1 376 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 TMEM251Q8N6I4 163 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 OR56B2PQ8NGI1 322 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 GHRLQ9UBU3 117 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 C14orf166Q9Y224 244 aaKnown RBP8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SESN1Q9Y6P5 492 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 FOXI3A8MTJ6 420 aaPredicted RBP8.96□□□□□ -0.97
LIMA1-201ENST00000341247 OR5H8P0DN80 308 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 PTGER4P35408 488 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 CBX5P45973 191 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 LHX2P50458 406 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 BTN1A1Q13410 526 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 FAM189A2Q15884 450 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 DBX2Q6ZNG2 339 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 PXT1Q8NFP0 134 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 OR10AD1Q8NGE0 317 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 MARS2Q96GW9 593 aaKnown RBP8.96□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF442Q9H7R0 627 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SLC7A11Q9UPY5 501 aa8.96□□□□□ -0.97
LIMA1-201ENST00000341247 SPTBN2O15020 2390 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 DNPH1O43598 174 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 OR2F2O95006 317 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 NGFP01138 241 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 UBA52P62987 128 aaKnown RBP8.96□□□□□ -0.98
LIMA1-201ENST00000341247 OR2F1Q13607 317 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 PDSS1Q5T2R2 415 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 FAHD2BQ6P2I3 314 aaPredicted RBP8.96□□□□□ -0.98
LIMA1-201ENST00000341247 FAHD2AQ96GK7 314 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 RNF126Q9BV68 326 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 TM2D1Q9BX74 207 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 TAS2R3Q9NYW6 316 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 B4GALT7Q9UBV7 327 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 LIPGQ9Y5X9 500 aa8.96□□□□□ -0.98
LIMA1-201ENST00000341247 hCG_38984A0A1B0GV85 526 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 A0A1W2PR80 420 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 SYNGR4O95473 234 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 APOC3P02656 99 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 CLDN18P56856 261 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 PXDC1Q5TGL8 231 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 SLC22A25Q6T423 547 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 CLEC9AQ6UXN8 241 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 SPSB1Q96BD6 273 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 ZPBPQ9BS86 351 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 DBX1A6NMT0 343 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 TSPAN4O14817 238 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 SLC25A4P12235 298 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 PRKACBP22694 351 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 RBMXP38159 391 aaKnown RBP8.95□□□□□ -0.98
LIMA1-201ENST00000341247 GPM6AP51674 278 aa8.95□□□□□ -0.98
LIMA1-201ENST00000341247 PCBD1P61457 104 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms