RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 CLDN34H7C241 214 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 MGST1P10620 155 aaKnown RBP13.14□□□□□ -0.31
RRP1B-201ENST00000340648 TLE1Q04724 770 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 V9GYS6 101 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 KLF4O43474 513 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF439Q8NDP4 499 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 TMEM37Q8WXS4 190 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 APH1AQ96BI3 265 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
RRP1B-201ENST00000340648 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 LCTP09848 1927 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 TIMM8AO60220 97 aaPredicted RBP13.14□□□□□ -0.31
RRP1B-201ENST00000340648 FOXK1P85037 733 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 UBALD1Q8TB05 177 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 EDEM2Q9BV94 578 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 RECKO95980 971 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 CD200P41217 278 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 CYB561P49447 251 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 SHHQ15465 462 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 ANXA10Q9UJ72 324 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF320A2RRD8 509 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 FAM166BA8MTA8 275 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 LY86O95711 162 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ASAH2BP0C7U1 165 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 SNCAP37840 140 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF90Q03938 601 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ZDHHC23Q8IYP9 409 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ADPRHL1Q8NDY3 354 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 UTP23Q9BRU9 249 aaKnown RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 PNPP00491 289 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 FOSL1P15407 271 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 G0S2P27469 103 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 GPM6AP51674 278 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 UBE2G2P60604 165 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 INSM1Q01101 510 aaPredicted RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 LMO7DNF2Z398 122 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 F6UZH7 168 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 FGF7P21781 194 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ZBTB25P24278 435 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 MGAT2Q10469 447 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 SLC26A10Q8NG04 563 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 PTPMT1Q8WUK0 201 aaPredicted RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 SOSTQ9BQB4 213 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF732B4DXR9 585 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 GLB1P16278 677 aa13.13□□□□□ -0.31
RRP1B-201ENST00000340648 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 SURF2Q15527 256 aaPredicted RBP13.13□□□□□ -0.31
RRP1B-201ENST00000340648 K7EQS6 105 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 COX5AP20674 150 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF774Q6NX45 483 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
RRP1B-201ENST00000340648 RNF133Q8WVZ7 376 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 FAM103A1Q9BTL3 118 aaKnown RBP13.12□□□□□ -0.31
RRP1B-201ENST00000340648 SEC16AO15027 2179 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
RRP1B-201ENST00000340648 RAB9BQ9NP90 201 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ZIC2O95409 532 aaPredicted RBP13.12□□□□□ -0.31
RRP1B-201ENST00000340648 C2orf68Q2NKX9 166 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 PRAMEF6Q5VXH4 476 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
RRP1B-201ENST00000340648 LMX1BO60663 402 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 NAAAQ02083 359 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 ADGRG7Q96K78 797 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
RRP1B-201ENST00000340648 TRBV5-7A0A0A0MS05 114 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 G3V3Q6 166 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 RPS4Y1P22090 263 aaKnown RBP13.11□□□□□ -0.31
RRP1B-201ENST00000340648 MMP16P51512 607 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 EDDM3BP56851 147 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 DCAF12Q5T6F0 453 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 DRAM2Q6UX65 266 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 FOXS1O43638 330 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 PATE4P0C8F1 98 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 PGA3P0DJD8 388 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 HLA-DRB3P79483 266 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms