RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 EML6Q6ZMW3 1958 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 TNFSF11O14788 317 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-201ENST00000340437 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-201ENST00000340437 MEOX2P50222 304 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 GRB2P62993 217 aaKnown RBP12.59□□□□□ -0.39
CPSF7-201ENST00000340437 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 TMEM182Q6ZP80 229 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-201ENST00000340437 FAM24BQ8N5W8 94 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 WDSUB1Q8N9V3 476 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 OR6X1Q8NH79 312 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 SLC22A8Q8TCC7 542 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 SGK3Q96BR1 496 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 AK3Q9UIJ7 227 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
CPSF7-201ENST00000340437 CST4P01036 141 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 PIGCQ92535 297 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 MR1Q95460 341 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 FANCFQ9NPI8 374 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 SMCO4Q9NRQ5 59 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
CPSF7-201ENST00000340437 TRBV6-7A0A0A0MS04 114 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 IGLV3-19P01714 112 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 MPZP25189 248 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 GSK3AP49840 483 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 AWAT1Q58HT5 328 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF774Q6NX45 483 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 FBXW12Q6X9E4 464 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ALKBH3Q96Q83 286 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF700Q9H0M5 742 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 LIME1Q9H400 295 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF442Q9H7R0 627 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 DKKL1Q9UK85 242 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 GEMIN2O14893 280 aaKnown RBP12.58□□□□□ -0.4
CPSF7-201ENST00000340437 DHRS3O75911 302 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 CCL7P80098 99 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 SPACA9Q96E40 222 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-201ENST00000340437 SHDQ96IW2 340 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 GPR37O15354 613 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ONECUT2O95948 504 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 B4GALT1P15291 398 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 ACKR3P25106 362 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 YRDCQ86U90 279 aaKnown RBP12.58□□□□□ -0.4
CPSF7-201ENST00000340437 C17orf82Q86X59 251 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-201ENST00000340437 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 NEK7Q8TDX7 302 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 BORCS8Q96FH0 119 aa12.58□□□□□ -0.4
CPSF7-201ENST00000340437 MBPP02686 304 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 RPS2P15880 293 aaKnown RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF529Q6P280 563 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 FBXL14Q8N1E6 418 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 NIT2Q9NQR4 276 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 A0A1W2PPE2 198 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 FIGNL2A6NMB9 653 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 NQO2P16083 231 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 PTGDSP41222 190 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 SLC35A1P78382 337 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 GUK1Q16774 197 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 METTL9Q9H1A3 318 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 OCIAD1Q9NX40 245 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 DHHO43323 396 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 JTBO76095 146 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 CCL3P10147 92 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 SUMO3P55854 103 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 EIF2S3LQ2VIR3 472 aaKnown RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
CPSF7-201ENST00000340437 SMIM8Q96KF7 97 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
CPSF7-201ENST00000340437 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 SULT1A2P50226 295 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 FAM212BQ9NTI7 297 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 UMAD1C9J7I0 102 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 DVL1P1P54792 670 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 HNF4GQ14541 408 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 FAM189A2Q15884 450 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 SAT2Q96F10 170 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 NELFAQ9H3P2 528 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 PTRH2Q9Y3E5 179 aaKnown RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 DIDO1Q9BTC0 2240 aaKnown RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 BORCS7-ASMTA0A0B4J1R7 106 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 COLCA2A8K830 154 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms