RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RD3LP0DJH9 198 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 TCN2P20062 427 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 MAS1LP35410 378 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 MMP16P51512 607 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 SSR4P51571 173 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 RAB2AP61019 212 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF239Q16600 458 aaKnown RBP16.44■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF529Q6P280 563 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 OR13G1Q8NGZ3 307 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 CYYR1Q96J86 154 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 PARP12Q9H0J9 701 aaKnown RBP16.44■□□□□ 0.22
PSPC1-201ENST00000338910 AMDHD2Q9Y303 409 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 MEMO1Q9Y316 297 aa16.44■□□□□ 0.22
PSPC1-201ENST00000338910 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-201ENST00000338910 NPIPB13A6NJU9 1138 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 NPIPB4C9JG80 1138 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 K7EPK0 472 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 SFTPBP07988 381 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
PSPC1-201ENST00000338910 FCGR2CP31995 323 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 RAB5CP51148 216 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 RHEBQ15382 184 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 PCK2Q16822 640 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 C9orf152Q5JTZ5 239 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 CARD17Q5XLA6 110 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 DEGS2Q6QHC5 323 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 FAM71E2Q8N5Q1 922 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 TMEM104Q8NE00 496 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 OR1J1Q8NGS3 322 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 OSGIN2Q9Y236 505 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 A0A1W2PNV4 684 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 A0A1W2PPE2 198 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 FIGNL2A6NMB9 653 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 SOCS1O15524 211 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 RAD51DO75771 328 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 TTRP02766 147 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 JMJD7P0C870 316 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 GLRA1P23415 457 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 OTX2P32243 289 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF468Q5VIY5 522 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-201ENST00000338910 RNF144BQ7Z419 303 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF101Q8IZC7 436 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 OR13C9Q8NGT0 318 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 OR5H2Q8NGV7 314 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 RAB3CQ96E17 227 aa16.43■□□□□ 0.22
PSPC1-201ENST00000338910 TMEM33P57088 247 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 UBAC2Q8NBM4 344 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 C11orf40Q8WZ69 217 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 MRPL13Q9BYD1 178 aaKnown RBP16.42■□□□□ 0.22
PSPC1-201ENST00000338910 PROK2Q9HC23 129 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 FAM212BQ9NTI7 297 aaPredicted RBP16.42■□□□□ 0.22
PSPC1-201ENST00000338910 FAM206AQ9NX38 181 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 TCFL5Q9UL49 500 aa16.42■□□□□ 0.22
PSPC1-201ENST00000338910 UMAD1C9J7I0 102 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF93P35789 620 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-201ENST00000338910 CLRN1P58418 232 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 MFAP5Q13361 173 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 C6orf15Q6UXA7 325 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-201ENST00000338910 C1orf147Q96MC9 270 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-201ENST00000338910 PFDN5Q99471 154 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 SYT7O43581 403 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 NME2P1O60361 137 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 SLC34A2O95436 690 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 H2BFMP0C1H6 154 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 GPX4P36969 197 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-201ENST00000338910 TMEM50BP56557 158 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 PYY3Q5JQD4 70 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-201ENST00000338910 OR10H5Q8NGA6 315 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 OR5D14Q8NGL3 314 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 YPEL4Q96NS1 127 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 ANGPTL4Q9BY76 406 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 SMIM3Q9BZL3 60 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 ARV1Q9H2C2 271 aa16.41■□□□□ 0.22
PSPC1-201ENST00000338910 A0A1W2PNU3 283 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-201ENST00000338910 DEDDO75618 318 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 MPIG6BO95866 241 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 IFNA17P01571 189 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 DANCRP0C864 163 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 HOXA5P20719 270 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 IAH1Q2TAA2 248 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-201ENST00000338910 NSUN5P2Q63ZY6 315 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 RNF133Q8WVZ7 376 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 IFITM10A6NMD0 228 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 C9orf172C9J069 976 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 TRAF3IP2O43734 574 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF43P17038 809 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 CDAP32320 146 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 MLF1P58340 268 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 SSTP61278 116 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 THEM4Q5T1C6 240 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 GLIPR1L1Q6UWM5 242 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 ZNF565Q8N9K5 539 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 OR56B1Q8NGI3 324 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 CT55Q8WUE5 264 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 SLC25A43Q8WUT9 341 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-201ENST00000338910 SPACA5Q96QH8 159 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 PRRX2Q99811 253 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 EIF5A2Q9GZV4 153 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms