RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TOX4O94842 621 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 ZFPL1O95159 310 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 GABRA2P47869 451 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 CEBPDP49716 269 aaPredicted RBP12.57□□□□□ -0.4
PRKN-201ENST00000338468 FUT6P51993 359 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 CAV3P56539 151 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 ACTG1P63261 375 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 SMIM21Q3B7S5 101 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 BRD3OSQ6XYD6 125 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 RNF144BQ7Z419 303 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 SGMS2Q8NHU3 365 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 MRPL48Q96GC5 212 aaKnown RBP12.57□□□□□ -0.4
PRKN-201ENST00000338468 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
PRKN-201ENST00000338468 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
PRKN-201ENST00000338468 MTCH1Q9NZJ7 389 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 SLC25A10Q9UBX3 287 aaPredicted RBP12.57□□□□□ -0.4
PRKN-201ENST00000338468 HHLA2Q9UM44 414 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 POLDIP2Q9Y2S7 368 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 MDFIC2A0A1B0GVS7 189 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 NXPH2O95156 264 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 SERPINA3P01011 423 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 ATF1P18846 271 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 DCKP27707 260 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 PRDX2P32119 198 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 CAPGP40121 348 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
PRKN-201ENST00000338468 UBA52P62987 128 aaKnown RBP12.56□□□□□ -0.4
PRKN-201ENST00000338468 IL18R1Q13478 541 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 METTL11BQ5VVY1 283 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 RUSC1-AS1Q66K80 236 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 XAF1Q6GPH4 301 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 Q8N7P7 452 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 ZNF676Q8N7Q3 588 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 DNAAF1Q8NEP3 725 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 RPS4Y2Q8TD47 263 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 FBLIM1Q8WUP2 373 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
PRKN-201ENST00000338468 H0YAE9 185 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 KCNAB3O43448 404 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 GBX2P52951 348 aaPredicted RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 CNN3Q15417 329 aaKnown RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 OR2G6Q5TZ20 316 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 GPR157Q5UAW9 335 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 C3orf56Q8N813 242 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 SETD9Q8NE22 299 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 FAM216AQ8WUB2 273 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 NRG4Q8WWG1 115 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 RGP1Q92546 391 aaPredicted RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 GGHQ92820 318 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 SLAMF9Q96A28 289 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 PRDM13Q9H4Q3 707 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 CLEC2DQ9UHP7 191 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 DIMT1Q9UNQ2 313 aaKnown RBP12.55□□□□□ -0.4
PRKN-201ENST00000338468 HSPE1-MOB4S4R3N1 261 aa12.55□□□□□ -0.4
PRKN-201ENST00000338468 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 TMEM212A6NML5 194 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 TRIM77I1YAP6 450 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 KNG1P01042 644 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 MT-ND2P03891 347 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 ZNF20P17024 532 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 NDUFB7P17568 137 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 AZGP1P25311 298 aaKnown RBP12.54□□□□□ -0.4
PRKN-201ENST00000338468 RBP2P50120 134 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 DLX1P56177 255 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 PRB3Q04118 309 aaPredicted RBP12.54□□□□□ -0.4
PRKN-201ENST00000338468 PDCD1Q15116 288 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 DEFB112Q30KQ8 113 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 SLC25A26Q70HW3 274 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 TMEM185AQ8NFB2 350 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 TNFRSF14Q92956 283 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 LHX4Q969G2 390 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 CEP19Q96LK0 163 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 ONECUT1Q9UBC0 465 aa12.54□□□□□ -0.4
PRKN-201ENST00000338468 CAB39Q9Y376 341 aaPredicted RBP12.54□□□□□ -0.4
PRKN-201ENST00000338468 SIRT4Q9Y6E7 314 aaPredicted RBP12.54□□□□□ -0.4
PRKN-201ENST00000338468 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 INMTO95050 263 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 LALBAP00709 142 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 IGHV1-69P01742 117 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 PRKACBP22694 351 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 NPBWR2P48146 333 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms