RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MLF2Q15773 248 aaPredicted RBP11.77□□□□□ -0.53
COL2A1-201ENST00000337299 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 GFI1BQ5VTD9 330 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 C11orf42Q8N5U0 333 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 S1PR5Q9H228 398 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 NKX2-2O95096 273 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 DOK3Q7L591 496 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 OR2I1PQ8NGU4 316 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 M1APQ8TC57 530 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 DCAF16Q9NXF7 216 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 CD207Q9UJ71 328 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 H3BMH7 237 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 HRKO00198 91 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 LINC01565O15544 149 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 MT-ATP6P00846 226 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL2A1-201ENST00000337299 FAM53BQ14153 422 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 RPS4Y2Q8TD47 263 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
COL2A1-201ENST00000337299 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 HTR5AP47898 357 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF133P52736 654 aaPredicted RBP11.76□□□□□ -0.53
COL2A1-201ENST00000337299 PAX5Q02548 391 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 TCTN2Q96GX1 697 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 ATP5SQ99766 215 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 ADAM20O43506 726 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 WDR1O75083 606 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 LTC4SQ16873 150 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 TMEM52BQ4KMG9 183 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 Q6ZN92 141 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 PSMF1Q92530 271 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 SHDQ96IW2 340 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
COL2A1-201ENST00000337299 CACFD1Q9UGQ2 172 aa11.76□□□□□ -0.53
COL2A1-201ENST00000337299 SHISA8B8ZZ34 492 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 UPK3AO75631 287 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 RAC2P15153 192 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 HOXA5P20719 270 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 P2RY4P51582 365 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 DYNLT3P51808 116 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 TPPP2P59282 170 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 DEFB133Q30KQ1 61 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
COL2A1-201ENST00000337299 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 ARHGEF39Q8N4T4 335 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 FGF14Q92915 247 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 COL11A1P12107 1806 aaPredicted RBP11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 HSPB2A8KAH6 182 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 G3V3Y1 287 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 CDC14BO60729 498 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 TTRP02766 147 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 NGFRP08138 427 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 S100A7P31151 101 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 PPP1CBP62140 327 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 HSPB2Q16082 182 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 OR2T10Q8NGZ9 312 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MISP3Q96FF7 219 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 FOXQ1Q9C009 403 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 SLC25A22Q9H936 323 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
COL2A1-201ENST00000337299 IGHV3-64DA0A0J9YX35 117 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 UBE2L5PA0A1B0GUS4 154 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 RAMP1O60894 148 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 HKR1P10072 659 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MSX1P28360 303 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF154Q13106 437 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 KISS1Q15726 138 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 TECTBQ96PL2 329 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 SMOC1Q9H4F8 434 aa11.75□□□□□ -0.53
COL2A1-201ENST00000337299 MASP2O00187 686 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 GKN2Q86XP6 184 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 HDHD3Q9BSH5 251 aaPredicted RBP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 TP53TG5Q9Y2B4 290 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 RER1O15258 196 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 DRD1P21728 446 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 GNG10P50151 68 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 TRIM61Q5EBN2 209 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 ERGIC1Q969X5 290 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms